pyproject.toml

[build-system]
requires = ["setuptools>=67", "scikit-build-core~=0.6.0", "pybind11~=2.13"]
build-backend = "scikit_build_core.build"

[project]
name = "chalc"
version = "8.0.1"
authors = [{ name = "Abhinav Natarajan", email = "natarajan@maths.ox.ac.uk" }]
description = "Persistent homology of chromatic Delaunay filtrations"
readme = { file = "README.md", content-type = "text/markdown" }
requires-python = ">=3.12"
license = { file = "COPYING" }
keywords = [
	"topological data analysis",
	"TDA",
	"chromatic Delaunay",
	"computational geometry",
	"computational topology",
	"persistent homology",
]
dependencies = [
	"numpy~=2.0",
	"phimaker~=0.1",
	"pandas~=2.2",
	"matplotlib~=3.9",
	"seaborn~=0.13",
	"h5py~=3.12",
]
classifiers = [
	"Development Status :: 3 - Alpha",
	"Intended Audience :: Science/Research",
	"Topic :: Scientific/Engineering :: Mathematics",
	"License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)",
	"Programming Language :: C++",
	"Programming Language :: Python :: 3",
	"Programming Language :: Python :: Implementation :: CPython",
	"Programming Language :: Python :: Implementation :: PyPy",
]

[project.urls]
Homepage = "https://abhinavnatarajan.github.io/Chalc"
Documentation = "https://abhinavnatarajan.github.io/Chalc"
Repository = "https://github.com/abhinavnatarajan/Chalc.git"

[dependency-groups]
dev = [
	"furo>=2024.8.6",
	"ipykernel~=6.29",
	"ipympl~=0.9",
	"ipython~=8.29",
	"nbsphinx~=0.9",
	"pybind11-stubgen~=2.5",
	"pytest~=8.3",
	"sphinx-autoapi~=3.3",
	"sphinx-design~=0.6",
	"sphinx-toolbox~=3.5",
	"sphinx~=8.0",
]

[tool.scikit-build]
cmake.verbose = true
cmake.build-type = "Release"
cmake.minimum-version = "3.23"
logging.level = "DEBUG"
sdist.exclude = [".github/", ".git/"]
build-dir = "build/{wheel_tag}"
wheel.packages = ["src/chalc"]
wheel.install-dir = "chalc"
experimental = true

[tool.pytest.ini_options]
addopts = ["--import-mode=importlib"]

[tool.ruff]
line-length = 100

[tool.ruff.format]
quote-style = "double"
indent-style = "tab"
line-ending = "auto"
skip-magic-trailing-comma = false
docstring-code-format = false
docstring-code-line-length = "dynamic"

[tool.ruff.lint]
select = [ "ALL" ]
ignore = [
	# "CPY", # flake8-copyright
	"W191", # pylint (disallows tab indentation)
	"D206", # pydocstyle (disallows tab indentation in docstring)
	"PLR0913", # refactor (too many arguments in function signature)
	"ERA" # commented code
]