MAINT: Update CI configurations and handle sanity checks #1365
Workflow file for this run
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| name: Linux and MacOS CI | |
| on: [push, pull_request] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| name: test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # macos-latest doesn't have 3.8 anymore or pypy-3.9 .. | |
| os: ["ubuntu-latest", "macos-13"] | |
| python-version: ["3.8", "3.12", "pypy-3.9"] | |
| r-version: ['release'] | |
| timeout-minutes: 60 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| # We need Python 3.8 to always be installed, so tests with | |
| # multiple environments can run. | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.8 | |
| - name: Install mercurial and conda | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew update | |
| brew install mercurial | |
| brew install --cask anaconda | |
| - name: Set up Python version ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: pyproject.toml | |
| - name: Setup a browser for more tests | |
| uses: browser-actions/setup-chrome@latest | |
| - name: Set up R version ${{ matrix.r-version }} | |
| uses: r-lib/actions/[email protected] | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Install dependencies (standard) | |
| if: matrix.python-version != '3.12.0-rc.2' | |
| run: python -m pip install ".[test,hg,testR]" | |
| - name: Install dependencies (with --pre) | |
| if: matrix.python-version == '3.12.0-rc.2' | |
| run: python -m pip install ".[test,hg,testR]" --pre | |
| - name: Install asv | |
| run: pip install . | |
| - name: Run tests | |
| run: python -m pytest -v --timeout=300 --webdriver=ChromeHeadless --durations=100 test | |
| test_env: | |
| name: test_environments | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest", "macos-latest"] | |
| r-version: ['release'] | |
| fail-fast: false | |
| timeout-minutes: 10 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: mamba-org/[email protected] | |
| with: | |
| init-shell: >- | |
| bash | |
| environment-name: test-env | |
| cache-environment: true | |
| create-args: >- | |
| python | |
| pip | |
| libmambapy<2.0 | |
| conda-build | |
| - name: Install dependencies | |
| run: python -m pip install ".[test,hg]" --pre | |
| shell: micromamba-shell {0} | |
| - name: Install asv | |
| run: pip install . | |
| shell: micromamba-shell {0} | |
| - name: Run tests | |
| run: pytest -k environment_bench -vvvvv | |
| shell: micromamba-shell {0} | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.x' | |
| cache: pip | |
| cache-dependency-path: pyproject.toml | |
| - name: Install asv | |
| run: pip install ".[doc]" | |
| - name: Build docs | |
| run: sphinx-build -W docs/source html |