This is the Readme file for NSGA-II code.
Basically this version is a Refactored version of the original code in order to make the code structure more portable. Several changes have been made:
- The NSGA2Type type has been defined to carry all the necessary parameters of the NSGA2 algorithm. This will reduce the number of external variables and reduce the possible conflict when it uses within another routine.
- Three function has been extracted from the main() function, previously in nsga2r.c.
- ReadParamters: Read the parameters through input file or command line
- InitNSGA2: Initialize output files, allocate memory, and perform the first generation
- NSGA2: Run the generation, save the results and free the allocated memory.
- PrintNSGA2Parameters: Print the input parameters.
- Two extra void pointers have been provided and passed around to the function that has to call
evaluatefunction. These are helpful when you want to integrate the algorithm to your code (e.g. simulator). Usingvoid *inpandvoid *outpointer you could pass your simulator parameters around without changing the structure of NSGA2, as long as your objective function knows how to handle theinpandoutto produce the objective values.
NSGA-II: Non-dominated Sorting Genetic Algorithm - II
Please refer to the following paper for details about the algorithm:
- Authors: Dr. Kalyanmoy Deb, Sameer Agrawal, Amrit Pratap, T Meyarivan
- Paper Title: A Fast and Elitist multi-objective Genetic Algorithm: NSGA-II
- Journal: IEEE Transactions on Evolutionary Computation (IEEE-TEC)
- Year: 2002
- Volume: 6
- Number: 2
- Pages: 182-197
This archive contains routines for plotting the objective data real-time using gnuplot. The code has been written for posix compliant operating systems and uses sta ndard piping method provided by GNU C library. The routines should work on any unix and unix like OS having gnuplot installed and which are posix compliant.
Makefile has been provided for compiling the program on linux (and unix-like) systems. Edit the Makefile to suit your need. By default, provided Makefile attempts to compile and link all the existing source files into one single executable.
Name of the executable produced is: nsga2r
To run the program type: ./nsga2r random_seed or ./nsga2r random_seed < input_data/inp_file.in
Here random_seed is a real number in (0,1) which is used as a seed for random number generator, and "inp_file.in" is the file that stores all the input parameters
| File | Description |
|---|---|
| initial_pop.out | This file contains all the information about initial population. |
| final_pop.out | This file contains the data of final population. |
| all_pop.out | This file contains the data of populations at all generations. |
| best_pop.out | This file contains the best solutions obtained at the end of simulation run. |
| params.out | This file contains the information about input parameters as read by the program. |
| Parameter | Description |
|---|---|
| popsize | This variable stores the population size (a multiple of 4) |
| ngen | Number of generations |
| nobj | Number of objectives |
| ncon | Number of constraints |
| nreal | Number of real variables |
| min_realvar[i] | minimum value of i^{th} real variable |
| max_realvar[i] | maximum value of i^{th} real variable |
| pcross_real | probability of crossover of real variable |
| pmut_real | probability of mutation of real variable |
| eta_c | distribution index for real variable SBX crossover |
| eta_m | distribution index for real variable polynomial mutation |
| nbin | number of binary variables |
| nbits[i] | number of bits for i^{th} binary variable |
| min_binvar[i] | minimum value of i^{th} binary variable |
| max_binvar[i] | maximum value of i^{th} binary variable |
| pcross_bin | probability of crossover for binary variable |
| pmut_bin | probability of mutation for binary variable |
| choice | option to display the data realtime using gnuplot |
| obj1, obj2, obj3 | index of objectives to be shown on x, y and z axes respectively |
| angle1, angle2 | polar and azimuthal angle required for location of eye |
Edit the source file problemdef.c to define your test problem. Some sample problems (24 test problems from Dr. Deb's book - Multi-Objective Optimization using Evolutionary Algorithms) have been provided as examples to guide you how to define your own objectives and constraints functions. You can also link other source files with the code based on your need. Consider the points below when you are implementing your objective functions.
- The code has been written for minimization of objectives (min f_i). If you want to maximize a function, you may use negative of the function value as the objective value.
- A solution is said to be feasible if it does not violate any of the constraints. Constraint functions should evaluate to a quantity greater than or equal to zero (g_j >= 0), if the solution has to be feasible. A negative value of constraint means, it is being violated.
- If there are more than one constraints, it is advisable (though not mandatory) to normalize the constraint values by either reformulating them or dividing them by a positive non-zero constant.
| Files | Descriptions |
|---|---|
| nsga2.h | Header file containing declaration of global variables and functions |
| rand.h | Header file containing declaration of variables and functions for random number generator |
| allocate.c | Memory allocation and deallocation routines |
| auxiliary.c | auxiliary routines (not part of the algorithm) |
| crossover.c | Routines for real and binary crossover |
| crowddist.c | Crowding distance assignment routines |
| decode.c | Routine to decode binary variables |
| display.c | Routine to display the data real-time using gnuplot |
| dominance.c | Routine to perform non-domination checking |
| eval.c | Routine to evaluate constraint violation |
| fillnds.c | Non-dominated sorting based selection |
| initialize.c | Routine to perform random initialization to population members |
| list.c | A custom doubly linked list implementation |
| merge.c | Routine to merge two population into one larger population |
| mutation.c | Routines for real and binary mutation |
| nsga2r.c | Implementation of main function and the NSGA-II framework |
| problemdef.c | Test problem definitions |
| rand.c | Random number generator related routines |
| rank.c | Rank assignment routines |
| report.c | Routine to write the population information in a file |
| sort.c | Randomized quick sort implementation |
| tourselect.c | Tournament selection routine |
Please feel free to send questions/comments/doubts/suggestions/bugs etc. to [email protected]
Dr. Kalyanmoy Deb 14th June 2005 http://www.iitk.ac.in/kangal/