schemes_manifest.json

{
    "metadata": "Primer schemes for real-time genome epidemiology",
    "repository": "https://github.com/artic-network/primer-schemes",
    "latest_doi": "10.5281/zenodo.4004423",
    "license": "CC-BY-4",
    "schemes": {
        "ebola": {
            "aliases": [
                "ebola",
                "ebov",
                "zaire"
            ],
            "latest_version": "3",
            "primer_urls": {
                "1": "https://github.com/artic-network/primer-schemes/raw/master/ZaireEbola/V1/ZaireEbola.primer.bed",
                "2": "https://github.com/artic-network/primer-schemes/raw/master/ZaireEbola/V2/ZaireEbola.primer.bed",
                "3": "https://github.com/artic-network/primer-schemes/raw/master/ZaireEbola/V3/ZaireEbola.primer.bed"
            },
            "reference_urls": {
                "1": "https://github.com/artic-network/primer-schemes/raw/master/ZaireEbola/V1/ZaireEbola.reference.fasta",
                "2": "https://github.com/artic-network/primer-schemes/raw/master/ZaireEbola/V2/ZaireEbola.reference.fasta",
                "3": "https://github.com/artic-network/primer-schemes/raw/master/ZaireEbola/V3/ZaireEbola.reference.fasta"
            },
            "primer_sha256_checksums": {
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        },
        "nipah": {
            "aliases": [
                "nipah",
                "niv"
            ],
            "latest_version": "1",
            "primer_urls": {
                "1": "https://github.com/artic-network/primer-schemes/raw/master/Nipah/V1/NiV_6_Malaysia.primer.bed"
            },
            "reference_urls": {
                "1": "https://github.com/artic-network/primer-schemes/raw/master/Nipah/V1/NiV_6_Malaysia.reference.fasta"
            },
            "primer_sha256_checksums": {
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            "reference_sha256_checksums": {
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        "sars-cov-2": {
            "aliases": [
                "sars-cov-2",
                "scov2",
                "ncov",
                "ncov-2019"
            ],
            "latest_version": "5.3.2",
            "primer_urls": {
                "1": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V1/nCoV-2019.primer.bed",
                "2": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V2/nCoV-2019.primer.bed",
                "3": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V3/nCoV-2019.primer.bed",
                "4": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V4/SARS-CoV-2.primer.bed",
                "4.1": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V4.1/SARS-CoV-2.primer.bed",
                "5.3.2": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V5.3.2/SARS-CoV-2.primer.bed"
            },
            "reference_urls": {
                "1": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V1/nCoV-2019.reference.fasta",
                "2": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V2/nCoV-2019.reference.fasta",
                "3": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V3/nCoV-2019.reference.fasta",
                "4": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V4/SARS-CoV-2.reference.fasta",
                "4.1": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V4.1/SARS-CoV-2.reference.fasta",
                "5.3.2": "https://github.com/artic-network/primer-schemes/raw/master/nCoV-2019/V5.3.2/SARS-CoV-2.reference.fasta"
            },
            "primer_sha256_checksums": {
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}