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Quite a number, I think most of the two-letter ones do not work for me. Exceptions as things like \DH (ETH) or \AA. Some of them I know how to fix (eg anything that starts with \u or \v), some I am not sure how they ended up the way they are (eg. \V for a circumflex below in Ḙ which is seems to require something like \textsubcircum{E} instead and then would only work in text mode, not math mode [if that is a concern]).
In charmap.pm there are replacements like this:
TeX-Encode/lib/TeX/Encode/charmap.pm
Line 646 in d449a33
which use a LaTeX command
\cs
which does not exist (at least for me LaTeX version). Instead to get ş I have to write\c s
or\c{s}
. Eg:results in
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