DESCRIPTION

Package: MDMAPR2.0
Type: Package
Title: Molecular Detection Mapping and Analysis in R.
Version: 0.2.0
Author: Abinaya Yogasekaram & Alka Benawra
Maintainer: Abinaya Yogasekaram <ayogasek@gmail.com>
Description: Runs a Shiny web application that merges raw 'qPCR' fluorescence data with related 
    metadata to visualize species presence/absence detection patterns and assess data quality. 
    The application calculates threshold values from raw fluorescence data using a method based 
    on the second derivative method, Luu-The et al (2005) <doi:10.2144/05382RR05>,  and utilizes 
    the ‘chipPCR’ package by Rödiger, Burdukiewicz, & Schierack (2015) <doi:10.1093/bioinformatics/btv205> 
    to calculate Cq values. The application allows users to interact with 
    visualizations such as a dynamic map, amplification curves and standard curves, that allow for 
    zooming and/or filtering. It also enables the generation of customized exportable reports based
    on filtered mapping data. 
License: What license is it under?
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.1
URL: https://github.com/ayogasekaram/MDMAPR2.0
BugReports: https://github.com/ayogasekaram/MDMAPR2.0/issues
Suggests: 
    knitr,
    rmarkdown
VignetteBuilder: knitr
Imports: 
    DT,
    leaflet,
    leaflet.extras,
    shinyjs,
    ggplot2,
    dplyr,
    readxl,
    plotly,
    reactable,
    writexl,
    berryFunctions,
    shinyWidgets,
    htmltools,
    methods,
    utils,
    stats,
    bslib
Depends:
    here,
    shiny,
    shinydashboard,
    shinyWidgets,
    xfun