From 2d311bf379dd15257a26b20c5a59e5dc136183c9 Mon Sep 17 00:00:00 2001 From: Nick Croucher Date: Tue, 8 Oct 2024 12:13:36 +0100 Subject: [PATCH] Fix output name processing --- PopPUNK/__main__.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/PopPUNK/__main__.py b/PopPUNK/__main__.py index de8f8360..616cc794 100644 --- a/PopPUNK/__main__.py +++ b/PopPUNK/__main__.py @@ -472,7 +472,7 @@ def main(): plot_scatter(distMat, output, output + " distances") - genome_lengths, ambiguous_bases = get_database_statistics(args.output) + genome_lengths, ambiguous_bases = get_database_statistics(output) plot_database_evaluations(args.output, genome_lengths, ambiguous_bases) #******************************#