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eB3Kitnew.json
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eB3Kitnew.json
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[
{
"group_name": "Biobank Applications",
"group_members": [
{
"app_name": "app-baobab",
"app_dispay_name": "Baobab",
"short_description": "Biobank Information Management System (BIMS)",
"installable": true,
"decoration": "new",
"tags": ["Sample Management", "LIMS"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""},
{"docker_version": "https", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-openspecimenTNG",
"app_dispay_name": "OpenSpecimen",
"short_description": "Sample Management",
"installable": true,
"decoration": "new",
"tags": ["Sample Management"],
"versions": [
{"docker_version": "development", "version": "v7.2.x", "tooltip": ""},
{"docker_version": "v6-3-x", "version": "v6.3.x", "tooltip": ""},
{"docker_version": "v7-0-x", "version": "v7.0.x", "tooltip": ""},
{"docker_version": "v7-1-x", "version": "v7.1.x", "tooltip": ""},
{"docker_version": "v7-2-x", "version": "v7.2.x", "tooltip": ""},
{"docker_version": "v8-0-x", "version": "v8.0.x", "tooltip": ""}
]
},
{
"app_name": "app-molgenis",
"app_dispay_name": "Molgenis",
"short_description": "EXCEL in the Web",
"installable": true,
"decoration": "",
"tags": ["Data Integration"],
"versions": [
{"docker_version": "development", "version": "v8.1.8", "tooltip": ""},
{"docker_version": "v1-0-1", "version": "v8.1.8", "tooltip": ""}
]
},
{
"app_name": "app-phenotips",
"app_dispay_name": "PhenoTips",
"short_description": "Phenotype Editor for the HPO ontology",
"installable": true,
"decoration": "",
"tags": ["Phenotyping", "Genetic Disorders"],
"versions": [
{"docker_version": "V1-0-10", "version": "v1.2.6", "tooltip": "stable version"},
{"docker_version": "development", "version": "v1.4.9", "tooltip": "V 1.3 with Pedigrees"}
]
},
{
"app_name": "app-azizi-amp",
"app_dispay_name": "Azizi AMP",
"short_description": "A downstream mobile data processing solution",
"installable": true,
"decoration": "",GMgPPazS7isck4d6R$LO
"tags": ["Data Management", "Data Integration", "Data Collection"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-azizi-onadata",
"app_dispay_name": "Azizi ODK Server",
"short_description": "A data collection server",
"installable": true,
"decoration": "",
"tags": ["Data Collection", "Data Management" ],
"versions": [
{"docker_version": "development", "version": "v0.1", "tooltip": ""}
]
},
{
"app_name": "app-redcap",
"app_dispay_name": "RedCap",
"short_description": "Survey Management System",
"installable": true,
"decoration": "",
"tags": ["Survey"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-i2b2",
"app_dispay_name": "i2b2",
"short_description": "Data Warehouse",
"installable": true,
"decoration": "",
"tags": ["Data Warehouse"],
"versions": [
{"docker_version": "development", "version": "v1", "tooltip": ""}
]
},
{
"app_name": "app-bbmri-eric-dir",
"app_dispay_name": "BBMRI-ERIC Dir-Update",
"short_description": "BBMRI-ERIC Dir-Update",
"installable": true,
"decoration": "",
"tags": ["Directory", "Biobank", "Data Management"],
"versions": [
{"docker_version": "development", "version": "v0.0", "tooltip": ""}
]
},
{
"app_name": "app-bbmri-eric-directory",
"app_dispay_name": "BBMRI-ERIC Directory",
"short_description": "BBMRI-ERIC Directory",
"installable": true,
"decoration": "",
"tags": ["Directory", "Biobank", "Data Management"],
"versions": [
{"docker_version": "development", "version": "v0.0", "tooltip": ""}
]
},
{
"app_name": "app-bbmri-eric-negotiator",
"app_dispay_name": "BBMRI-ERIC Negotiator",
"short_description": "BBMRI-ERIC Negotiator",
"installable": true,
"decoration": "",
"tags": ["Biobank", "Data Management"],
"versions": [
{"docker_version": "development", "version": "dev", "tooltip": ""}
]
},
{
"app_name": "app-bbmri-eric-connector",
"app_dispay_name": "BBMRI-ERIC Connector",
"short_description": "BBMRI-ERIC Connector",
"installable": true,
"decoration": "",
"tags": ["Biobank", "Data Management"],
"versions": [
{"docker_version": "development", "version": "dev", "tooltip": ""}
]
}
]
},
{
"group_name": "Digital Pathology Applications",
"group_members": [
{
"app_name": "app-girder",
"app_dispay_name": "Girder",
"short_description": "Data management platform for the web, developed by Kitware",
"installable": true,
"decoration": "",
"tags": ["Data Management", "Digital Pathology"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-omero",
"app_dispay_name": "Omero",
"short_description": "Digital Microscopy",
"installable": true,
"decoration": "",
"tags": ["Imaging", "Digital Pathology"],
"versions": [
{"docker_version": "development", "version": "v1", "tooltip": ""},
{"docker_version": "v-5-6-0", "version": "v5.6.0", "tooltip": ""}
]
},
{
"app_name": "app-histomicstk",
"app_dispay_name": "Histomics TK",
"short_description": "Toolkit for the analysis of Histopathology images in association with clinical and genomic data developed by Kitware",
"installable": false,
"decoration": "announced",
"tags": ["Imaging", "Digital Pathology"],
"versions": [
{"docker_version": "development", "version": "v1", "tooltip": ""}
]
},
{
"app_name": "app-xnat",
"app_dispay_name": "XNAT",
"short_description": "Open Source Imaging Framework",
"installable": true,
"decoration": "",
"tags": ["Imaging", "Digital Pathology"],
"versions": [
{"docker_version": "development", "version": "v1", "tooltip": ""}
]
},
{
"app_name": "app-molgenis",
"app_dispay_name": "Molgenis",
"short_description": "EXCEL in the Web",
"installable": true,
"decoration": "",
"tags": ["Data Integration"],
"versions": [
{"docker_version": "development", "version": "v3.0.1", "tooltip": ""},
{"docker_version": "v1-0-1", "version": "v3.0.1", "tooltip": ""}
]
},
{
"app_name": "app-seeddmsTNG",
"app_dispay_name": "SeedDMS",
"short_description": "Self-hosted file storage",
"installable": true,
"decoration": "",
"tags": ["Files", "Storage"],
"versions": [
{"docker_version": "5-1-5", "version": "5.1.5", "tooltip": "development version (5.1.5)"},
{"docker_version": "5-1-18", "version": "5.1.18", "tooltip": "development version (5.1.18)"},
{"docker_version": "6-0-11", "version": "6.0.11", "tooltip": "development version (6.0.11)"}
]
}
]
},
{
"group_name": "Bioinformatics Applications",
"group_members": [
{
"app_name": "app-stategraems",
"app_dispay_name": "STATegraEMS",
"short_description": "Experiment Management",
"installable": true,
"decoration": "",
"tags": ["Experiment Management System", "Bioinformatics"],
"versions": [
{"docker_version": "development", "version": "v1.0.0", "tooltip": ""}
]
},
{
"app_name": "app-galaksio",
"app_dispay_name": "Galaksio",
"short_description": "Galaksio",
"installable": true,
"decoration": "new",
"tags": ["Galaxy"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-galaxy",
"app_dispay_name": "Galaxy",
"short_description": "Galaxy",
"installable": true,
"decoration": "",
"tags": ["Galaxy"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""},
{"docker_version": "development", "version": "V1.1", "tooltip": ""}
]
},
{
"app_name": "app-exomeseq",
"app_dispay_name": "Galaxy-seq",
"short_description": "Galaxy instance running DNA-seq",
"installable": true,
"decoration": "",
"tags": ["Galaxy", "DNA"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-rna-workbench",
"app_dispay_name": "RNA workbench",
"short_description": "Galaxy instance running RNA workbench",
"installable": true,
"decoration": "",
"tags": ["Galaxy", "RNA"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-scaleus",
"app_dispay_name": "Scaleus",
"short_description": "Semantic Web Services Integration for Biomedical Applications",
"installable": false,
"decoration": "announced",
"tags": ["Data Management", "Linked Data"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
}
]
},
{
"group_name": "Helper Applications",
"group_members": [
{
"app_name": "app-taiga",
"app_dispay_name": "TAIGA",
"short_description": "Project management tool for multi-functional agile teams",
"installable": true,
"decoration": "",
"tags": ["Project Management", "Tool"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-orientdb",
"app_dispay_name": "OrientDB",
"short_description": "NoSQL Graph/ Document Database",
"installable": true,
"decoration": "",
"tags": ["Database", "NoSQL", "Graph Database"],
"versions": [
{"docker_version": "development", "version": "2.2.17", "tooltip": ""},
{"docker_version": "V2-1-25-01", "version": "v2.1.25", "tooltip": ""}
]
},
{
"app_name": "app-postgres",
"app_dispay_name": "PostgreSQL",
"short_description": "Object-relational database management system (ORDBMS)",
"installable": true,
"decoration": "",
"tags": ["Database"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-wordpress",
"app_dispay_name": "Wordpress",
"short_description": "Blog, Simple Webportal",
"installable": true,
"decoration": "",
"tags": ["Blog", "CMS"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-mycollab",
"app_dispay_name": "MyCollab CE",
"short_description": "Project Management System",
"installable": true,
"decoration": "",
"tags": ["Project Management"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-youtrack",
"app_dispay_name": "YouTrack",
"short_description": "Project management and issue tracking",
"installable": true,
"decoration": "",
"tags": ["Project Management", "Issue Tracking"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-plone",
"app_dispay_name": "Plone",
"short_description": "Content Management System",
"installable": true,
"decoration": "new",
"tags": ["CMS"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-drupal",
"app_dispay_name": "Drupal",
"short_description": "Content Management System",
"installable": true,
"decoration": "new",
"tags": ["CMS"],
"versions": [
{"docker_version": "development", "version": "v8.3.2", "tooltip": ""}
]
},
{
"app_name": "app-limesurvey",
"app_dispay_name": "LimeSurvey",
"short_description": "LimeSurvey 2.63.1",
"installable": true,
"decoration": "",
"tags": ["Survey"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-seeddmsTNG",
"app_dispay_name": "SeedDMS",
"short_description": "Self-hosted file storage",
"installable": true,
"decoration": "",
"tags": ["Files", "Storage"],
"versions": [
{"docker_version": "development", "version": "v5.1.6", "tooltip": "development version"},
{"docker_version": "V5_1_5_1", "version": "v5.1.5", "tooltip": "stable version"}
]
},
{
"app_name": "app-owncloud",
"app_dispay_name": "OwnCloud",
"short_description": "File sync and share server",
"installable": true,
"decoration": "",
"tags": ["Storage"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-nextcloud",
"app_dispay_name": "Nextcloud",
"short_description": "File sync and share server",
"installable": true,
"decoration": "",
"tags": ["Storage"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-teampass",
"app_dispay_name": "TeamPass",
"short_description": "Easy centralized Password Mangement",
"installable": true,
"decoration": "new",
"tags": ["Password Management", "Password database"],
"versions": [
{"docker_version": "development", "version": "v?", "tooltip": ""}
]
},
{
"app_name": "app-jenkins",
"app_dispay_name": "Jenkins",
"short_description": "Build great things at any scale",
"installable": true,
"decoration": "new",
"tags": ["Development", "Build tool"],
"versions": [
{"docker_version": "development", "version": "v2.176.2", "tooltip": ""}
]
}
]
},
{
"group_name": "Admin Dashboard",
"group_members": [
{
"app_name": "app-openldap",
"app_dispay_name": "OpenLDAP",
"short_description": "OpenLDAP Software is an open source implementation of the Lightweight Directory Access Protocol",
"installable": true,
"decoration": "",
"tags": ["User Integration", "Administration"],
"versions": [
{"docker_version": "development", "version": "vx.x", "tooltip": ""}
]
},
{
"app_name": "app-jupyter-datascience-notebook",
"app_dispay_name": "Jupyter Notebook",
"short_description": "Interactive data science and scientific computing",
"installable": true,
"decoration": "",
"tags": ["Data Integration", "Data Analysis"],
"versions": [
{"docker_version": "development", "version": "v4.2", "tooltip": ""}
]
},
{
"app_name": "app-bibbox-monitoring",
"app_dispay_name": "Monitoring",
"short_description": "Monitoring of Apps and Containers",
"installable": true,
"decoration": "",
"tags": ["Admin"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-bacula",
"app_dispay_name": "Backup",
"short_description": "Backup BIBBOX apps",
"installable": false,
"decoration": "announced",
"tags": ["Backup", "Admin"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-elasticstack",
"app_dispay_name": "Elastic Stack",
"short_description": "Elastic Search Stack",
"installable": true,
"decoration": "",
"tags": ["Search"],
"versions": [
{"docker_version": "V1-0-2", "version": "5.6.3", "tooltip": "stable version"},
{"docker_version": "development", "version": "6.0 RC2", "tooltip": "Not for production"}
]
},
{
"app_name": "app-dbninja",
"app_dispay_name": "DbNinja for MySQL",
"short_description": "DbNinja",
"installable": true,
"decoration": "",
"tags": ["Database", "Administration"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-adminer",
"app_dispay_name": "Adminer",
"short_description": "Adminer",
"installable": true,
"decoration": "",
"tags": ["Database", "Administration"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "app-mantis",
"app_dispay_name": "Mantis",
"short_description": "Mantis Bugtracker",
"installable": true,
"decoration": "",
"tags": ["Bugtracker", "Administration"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
},
{
"app_name": "dev-app-checker",
"app_dispay_name": "App Checker",
"short_description": "App Checkcer",
"installable": true,
"decoration": "new",
"tags": ["Development", "Administration"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
}
]
},
{
"group_name": "Training",
"group_members": [
{
"app_name": "app-training",
"app_dispay_name": "B3Africa Training",
"short_description": "B3Africa Trainings Platform",
"installable": true,
"decoration": "",
"tags": ["trainings"],
"versions": [
{"docker_version": "development", "version": "v1.0", "tooltip": ""}
]
}
]
},
{
"group_name": "Development and Testing (NOT FOR PRODUCTION)",
"group_members": [
{
"app_name": "app-template",
"app_dispay_name": "Application Template",
"short_description": "A Template of an APP, can not be installed",
"installable": false,
"decoration": "",
"tags": ["Development"],
"versions": [
{"docker_version": "development", "version": "v0.0", "tooltip": ""}
]
},
{
"app_name": "app-i2b2box",
"app_dispay_name": "i2b2box",
"short_description": "lightweight deployment of i2b2 hive",
"installable": true,
"decoration": "",
"tags": ["Development"],
"versions": [
{"docker_version": "development", "version": "v0.0", "tooltip": ""}
]
},
{
"app_name": "app-querytree",
"app_dispay_name": "Query Tree",
"short_description": "Ad-hoc reporting tool",
"installable": true,
"decoration": "",
"tags": ["Database", "Visualization"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-girder",
"app_dispay_name": "Girder",
"short_description": "Data management platform for the web, developed by Kitware",
"installable": true,
"decoration": "",
"tags": ["Data Management"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-knowage",
"app_dispay_name": "Knowage",
"short_description": "Open Source Business Analytics",
"installable": true,
"decoration": "",
"tags": ["Database", "BI"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-cytomine",
"app_dispay_name": "Cytomine",
"short_description": "Open-source rich internet application for collaborative analysis of multi-gigapixel images using machine learning.",
"installable": true,
"decoration": "",
"tags": ["Digital Pathology", "Slide Storage"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-rd-connect-finder",
"app_dispay_name": "RD-Connect Finder",
"short_description": "RD-Connect Finder",
"installable": true,
"decoration": "",
"tags": ["Directory"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
},
{
"app_name": "app-video-score",
"app_dispay_name": "Video Score",
"short_description": "Video Score",
"installable": true,
"decoration": "",
"tags": ["Video"],
"versions": [
{"docker_version": "development", "version": "latest", "tooltip": ""}
]
}
]
}
]