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/bin/scan_alignments Not Found #67

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ghost opened this issue Oct 28, 2020 · 1 comment
Open

/bin/scan_alignments Not Found #67

ghost opened this issue Oct 28, 2020 · 1 comment

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@ghost
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ghost commented Oct 28, 2020

Hi , I met "OSError: File not found: ../bin/scan_alignments" when I ran run_test.sh

Is this file missed in the source code?
@msahraeian
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Hi @SongboWangGit You should run build.sh and it will create the scan_alignments for you at neusomatic/bin/scan_alignments. You should use the path to this binary with the --scan_alignments_binary argument as in here.

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