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Over the weekend, it appears BTE may have misconfigured some queries to various BioThings APIs. Below are some examples (I'm pulling directly from Sentry, so queries are probably not formatted perfectly for directly pasting into curl/etc.):
TTD
expand
query details:
https://biothings.ci.transltr.io/ttd/query [400]
{
http.method: POST,
http.query: fields=subject.ttd_drug_id,+subject.name,+object.name&filter=_exists_:subject.ttd_drug_id+AND+(NOT+_exists_:subject.pubchem_compound)+AND++_exists_:object.mondo+AND+association.predicate:%22biolink:treats%22+AND+NOT++(association.clinical_trial.status:approved+OR+association.clinical_trial.status:%22phase+4%22+OR++association.clinical_trial.status:%22approved+(orphan+drug)%22+OR+association.clinical_trial.status:%22NDA+filed%22+OR++association.clinical_trial.status:investigative+OR+association.clinical_trial.status:patented+OR++association.clinical_trial.status:%22discontinued+in+preregistration%22+OR+association.clinical_trial.status:preregistration+OR++association.clinical_trial.status:%22withdrawn+from+market%22+OR+association.clinical_trial.status:preclinical)&size=1000
}
response:
{"code":400,"success":false,"error":"parse_exception","root_cuase_line_00":"request body or source parameter is required"}
Text Mining Targeted Association
expand
query details:
https://biothings.ci.transltr.io/text_mining_targeted_association/query [400]
{
http.method: POST,
http.query: fields=subject.DRUGBANK,association.edge_attributes,association.sources&filter=_exists_:subject.DRUGBANK+AND+association.edge_label:treats_or_applied_or_studied_to_treat+AND+_exists_:object.MONDO&size=1000
}
response:
{"code":400,"success":false,"error":"parse_exception","root_cuase_line_00":"request body or source parameter is required"}
It appears in both of these cases BTE is failing to send a request body -- this is more likely a problem with BTE's subquery generation than the annotations.
The text was updated successfully, but these errors were encountered:
Over the weekend, it appears BTE may have misconfigured some queries to various BioThings APIs. Below are some examples (I'm pulling directly from Sentry, so queries are probably not formatted perfectly for directly pasting into curl/etc.):
TTD
expand
query details:
response:
Text Mining Targeted Association
expand
query details:
response:
It appears in both of these cases BTE is failing to send a request body -- this is more likely a problem with BTE's subquery generation than the annotations.
The text was updated successfully, but these errors were encountered: