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Estimating substitution rates #33

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burbrink opened this issue Jan 9, 2018 · 2 comments
Open

Estimating substitution rates #33

burbrink opened this issue Jan 9, 2018 · 2 comments

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@burbrink
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burbrink commented Jan 9, 2018

Hey Guys,

Does treePL generate substitution rates that can be viewed somewhere? I see what looks like these rates as edge lengths in .r8s files, but I am just not sure.
If this is possible, could you explain where to get them and how to properly interpret the rates (are these per calibration unit [?my]).

Thanks everyone!

Frank
@wrshoemaker
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It's also not clear to me what the values mean in the .r8s file.

@jcarlosvillarreal
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hi guys, did you get any answer elsewhere ?

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@wrshoemaker @burbrink @jcarlosvillarreal