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repo2docker-r

JupyterHub-based repo2docker template for R.

  • Edit install.r to install your R packages.
  • Edit environment.yml to install Python packages.

Provides JupyterHub with RStudio integration. install.r uses r2u mechanism to automatically install any necessary system dependencies. apt-get is not necessary.

Automated builds on GitHub

To have GitHub actions automatically build your image, edit workflows/docker-rstudio.yml to have your repository and org instead of boettiger-lab/repo2docker-r throughout.