bugfixes

v0.0.5

• handle more chrMT namings
• allow extending introns
• fix bug where sample names were converted to dates

v0.0.4

v0.0.4

• plot aesthetics (#23)
• add sub-command seqcover save-transcripts

first public release

This is the first advertised release of seqcover. There are likely to be more small bugs and missing features, but the most blatant ones have been addressed.

Thanks to feedback from @oyvindbusk, Svetlana O, and Nicolas L.

v0.0.3

• fix bug for overlapping exons (#21)
• prefer "22" over "22_KI270879v1_alt"
• fix bug for no exons (#22 and thanks @oyvindbusk for reporting this and other issues)
• report e.g. "exon 1 / 6" when hovering.
• show genomic position next to gene

first public release

To get started, download the binary below or via:

wget https://github.com/brentp/seqcover/releases/download/v0.0.2/seqcover
chmod +x ./seqcover

which will work for any modern linux system. See README for details on how to run.

initial release

early release.