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Plotting Error in basenji_test.py #203

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ratheraarif opened this issue Dec 9, 2024 · 1 comment
Open

Plotting Error in basenji_test.py #203

ratheraarif opened this issue Dec 9, 2024 · 1 comment

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@ratheraarif
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Hi,
I ran the test example from: https://github.com/calico/basenji/blob/9e1c2e2f5b1b37ad11cfd2a1486d786d356d78a5/tutorials/train_test.ipynb. Everything works fine except for the basenji_test.py. I am not able to plot the results here. I use the following command
! basenji_test.py --ai 0,1,2 -o output/heart_test --rc --shifts "1,0,-1" models/params_small.json models/heart/model_best.h5 data/heart_l131k. The model predicts correctly but fails to generate the plots and gives the following error:

image

@davek44
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davek44 commented Dec 26, 2024

Hi, we're no longer actively developing here. Could I convince you to move to our new codebase? https://github.com/calico/baskerville

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