diff --git a/docs/src/index.md b/docs/src/index.md index 7c02618..bae63b3 100644 --- a/docs/src/index.md +++ b/docs/src/index.md @@ -22,5 +22,5 @@ To install UCIWWEIHR.jl, you can use the Julia package manager. Open the Julia R ```julia using Pkg -Pkg.add("git@github.com:cbernalz/UCIWWEIHR.jl.git") +Pkg.add("https://github.com/cbernalz/UCIWWEIHR.jl.git") ``` diff --git a/docs/src/tutorials/getting_started.md b/docs/src/tutorials/getting_started.md index 1b56f9a..6e10da4 100644 --- a/docs/src/tutorials/getting_started.md +++ b/docs/src/tutorials/getting_started.md @@ -8,7 +8,7 @@ To install the UCIWWEIHR.jl package, open the Julia REPL and run the following c ``` julia using Pkg -Pkg.add("git@github.com:cbernalz/UCIWWEIHR.jl.git") +Pkg.add("https://github.com/cbernalz/UCIWWEIHR.jl.git") ``` diff --git a/src/uciwweihr_model.jl b/src/uciwweihr_model.jl index b6196aa..bacba3b 100644 --- a/src/uciwweihr_model.jl +++ b/src/uciwweihr_model.jl @@ -252,7 +252,6 @@ The defaults for this fuction will follow those of the default simulation in gen return end sol_array = Array(sol) - I_comp_sol = clamp.(sol_array[2,2:end],1, 1e10) # Likelihood calculations------------ @@ -278,7 +277,7 @@ The defaults for this fuction will follow those of the default simulation in gen epsilon = epsilon, rt_vals = rt_vals, sigma_hosp = sigma_hosp, - H = H_comp, + H = sol_hosp, rt_init = rt_init, w_init = w_init )