Skip to content

Releases: cctbx/cctbx_project

2023.3

03 Apr 16:28
Compare
Choose a tag to compare
  • Bug fixes for RNA validation
  • Improved handling of B and pLDDT values in mmtbx.process_predicted_model
  • Bug fixes for validating C-beta deviations for D-amino acids
  • Bug fixes and improvements to cctbx.HKLviewer

2023.2

28 Feb 23:22
Compare
Choose a tag to compare
  • Improved modeling of histidine protonation states
  • Improved tool for merging models
  • Added resolution estimation for map docking (prepare_map_for_docking)
  • Bug fixes and improvements to cctbx.HKLviewer

2023.1

01 Feb 03:37
Compare
Choose a tag to compare
  • Enable rounding of occupancies so that the sum is equal to 1
  • New tool to validate torsions
  • Bug fixes and improvements to cctbx.HKLviewer

2022.12

02 Jan 11:57
Compare
Choose a tag to compare
  • New code for fitting histidine
  • DataManager can map scattering table types to data types

2022.11

02 Dec 21:01
Compare
Choose a tag to compare
  • Improved occupancy handling of multiple conformations so that the sum does not exceed 1
  • Improvements to reduce2 and probe2 tools for MolProbity

2022.10

02 Nov 18:26
Compare
Choose a tag to compare
  • Added array selection via data labels to CCTBXParser

    • Match partial labels to full labels in data file
    • Combine multiple label selections via the command line
  • Allow mosaic buil solvent model to have initial values

  • Fix bug where atoms may be missing in a super-sphere

  • Bug fixes and improvements to cctbx.HKLviewer

  • Switch to using libsvm-official for Python interface from libsvm

2022.9

02 Oct 01:38
Compare
Choose a tag to compare
  • Improvements to cctbx.HKLviewer for viewing output from xtriage or xtricorder
  • Improve stability of prepare_map_for_docking
  • DataManager models can now have multiple types (e.g. x-ray, neutron, etc.)
  • Fix any_reflection_file_reader when reading "hklf+ins/res" (#787)
  • Fix binary and source installers when /usr/bin/python is not available (#788)

2022.8

01 Sep 15:26
Compare
Choose a tag to compare
  • Update to handle new PAE format from AlphaFold
  • CCTBXParser can parse DataManager PHIL parameters and provide more information about ambiguous parameters
  • Initial support for density dependent restraints
  • Bug fixes and updates for cctbx.HKLviewer

2022.7

01 Aug 16:49
Compare
Choose a tag to compare
  • Clean up multiple mmtbx tests
  • Updated to RCSB API v2 for accessing data

2022.6

04 Jul 20:21
Compare
Choose a tag to compare
  • Added --dry-run flag to CCTBXParser to validate inputs
  • Bug fixes for cctbx.HKLviewer
  • Updates to reduce2 and probe2
  • Updates to restraints based on quantum mechanics