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Welcome to the SeqFaiLR wiki!

Overview

0. SeqFaiLR

Quick start: a short explanation of how SeqFaiLR works

1.1. Before you start
1.2. Initializing
1.3. Aligning reads
1.4. Quality analysis
1.5. GC bias analysis
1.6. Low complexity sequences

Details: for more details on scripts :)

2.1. Note on basecalling
2.2. Read alignment and associated analyses
2.3. Read quality and associated analyses 2.4. GC content analyses 2.5. Low complexity sequences analyses