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CPU version for structure inference? #85

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tommyhuangthu opened this issue Sep 27, 2024 · 1 comment
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CPU version for structure inference? #85

tommyhuangthu opened this issue Sep 27, 2024 · 1 comment

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@tommyhuangthu
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Dear team,

We have few protein targets that are longer than 1000 AAs. These targets caused the out-of-memory issues on both A100 40GB and A40 48GB GPUs in the University's cluster. The cluster does not have A100 80GB GPUs. Could your team provide a version that can use CPUs for structure inference?

Thanks,
Tommy

@arogozhnikov
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Hi Tommy,

there is already discussion #19 about CPU.
TLDR: that's not a priority for now. Compute time scales as N^3, so for big complexes you really want GPU.

Also see #69 , maybe some option will work for you

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