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Error in if (argv_c[[i]]) command = paste(command, " --", i, sep = "") :
missing value where TRUE/FALSE needed
Execution halted
Details:
PRSice version: 2.3.5 (Linux)
It seems like an issue related to missing values, but I’m not sure where the problem lies.
Any help or suggestions would be appreciated!
Thanks in advance.
The text was updated successfully, but these errors were encountered:
Hi,
I'm encountering an error when running PRSice-2. The command I'm using is as follows:
Rscript ~/PRsice/PRSice.R --prsice ~/PRsice/PRSice_linux --base ~/AD_gwas_clean.txt --target /home/EXTRADATA/RAW_DATA/bulk/ukb_imp_chr#_v3 --pheno ~/AD_phenotype.txt --chr Chromosome --A1 Effect_allele --snp MarkerName --A2 Non_Effect_allele --or OR --pvalue Pvalue --type bgen --keep-ambig --allow-inter --out AD_PRS
However, I get the following error message:
Error in if (argv_c[[i]]) command = paste(command, " --", i, sep = "") :
missing value where TRUE/FALSE needed
Execution halted
Details:
PRSice version: 2.3.5 (Linux)
It seems like an issue related to missing values, but I’m not sure where the problem lies.
Any help or suggestions would be appreciated!
Thanks in advance.
The text was updated successfully, but these errors were encountered: