diff --git a/.Rbuildignore b/.Rbuildignore index 8ca62412..a28a0185 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -12,3 +12,6 @@ ^pkgdown$ ^doc$ ^Meta$ +^.git-blame-ignore-revs$ +^.lintr$ +^DEVELOPMENT.md$ \ No newline at end of file diff --git a/.bumpversion.cfg b/.bumpversion.cfg deleted file mode 100644 index 7ad5a922..00000000 --- a/.bumpversion.cfg +++ /dev/null @@ -1,4 +0,0 @@ -[bumpversion] -current_version = 0.7.2 - -[bumpversion:file:DESCRIPTION] diff --git a/.gitignore b/.gitignore index 6384e142..de393a31 100644 --- a/.gitignore +++ b/.gitignore @@ -7,4 +7,9 @@ inst/doc docs /doc/ /Meta/ -*.DS_Store \ No newline at end of file +*.DS_Store + +# Delphi custom +renv/ +renv.lock +.Rprofile diff --git a/NAMESPACE b/NAMESPACE index ef55f68c..03e0e41d 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -79,6 +79,7 @@ importFrom(checkmate,assert_list) importFrom(checkmate,assert_logical) importFrom(checkmate,assert_numeric) importFrom(checkmate,assert_scalar) +importFrom(checkmate,checkInt) importFrom(checkmate,check_atomic) importFrom(checkmate,check_data_frame) importFrom(checkmate,test_set_equal) diff --git a/R/epiprocess.R b/R/epiprocess.R index 05737d58..e3918708 100644 --- a/R/epiprocess.R +++ b/R/epiprocess.R @@ -7,7 +7,7 @@ #' @importFrom checkmate assert assert_scalar assert_data_frame anyMissing #' assert_logical assert_list assert_character assert_class #' assert_int assert_numeric check_data_frame vname check_atomic -#' anyInfinite test_subset test_set_equal +#' anyInfinite test_subset test_set_equal checkInt #' @importFrom cli cli_abort cli_inform cli_warn #' @name epiprocess "_PACKAGE" diff --git a/man/autoplot.epi_df.Rd b/man/autoplot.epi_df.Rd index a87bc8ca..c97ea02f 100644 --- a/man/autoplot.epi_df.Rd +++ b/man/autoplot.epi_df.Rd @@ -56,10 +56,13 @@ autoplot(jhu_csse_daily_subset, case_rate_7d_av, .color_by = "none", .facet_by = "geo_value" ) -autoplot(jhu_csse_daily_subset, case_rate_7d_av, .color_by = "none", - .base_color = "red", .facet_by = "geo_value") +autoplot(jhu_csse_daily_subset, case_rate_7d_av, + .color_by = "none", + .base_color = "red", .facet_by = "geo_value" +) # .base_color specification won't have any effect due .color_by default autoplot(jhu_csse_daily_subset, case_rate_7d_av, - .base_color = "red", .facet_by = "geo_value") + .base_color = "red", .facet_by = "geo_value" +) }