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Minor bug fixes #3

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Minor bug fixes #3

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@jhtu jhtu commented Jan 23, 2017

Fixed some bugs that arose when trying to compile the IBPM code and examples on a Windows 10 machine. With new fixes, code and examples compile/execute successfully.

Had to include <cstring> to avoid compile error due to the use of strncopy.
NavierStokesModel now takes in BaseFlow objects rather than Flux objects.
Also, the pitch and plunge examples now create their own output directories (as
the Oseen example already did).
…to zero.

Previously, vorticity had been set to zero, but boundary forces and fluxes were
not specified.  This meant the associated arrays were full of random data,
leading to nondeterministic and incorrect behavior.
Was previously entered as a long decimal.  Now uses arctan, as is done in other
files.
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jhtu commented Mar 7, 2017

Fixed a few minor bugs. The repository is now in better shape for new users, who would expect, at minimum, to be able to: (1) compile the code, (2) run the examples.

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jhtu commented Mar 7, 2017

This pull request fixes Issues #4 and #5.

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