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This repository has been archived by the owner on Sep 8, 2022. It is now read-only.

daniellenewby/CancerSurvivalExtrapolation

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Natural History and Survival extrapolation of different cancers

Introduction

This study is focussing on determining the usefulness of real world data to determine and predict cancer survival for specific cancers. We will focus on the following cancers:

  • Breast
  • Colorectal
  • Lung
  • Liver
  • Stomach
  • Head/neck
  • Prostate

THIS IS UNDER DEVELOPEMENT DO NOT RUN THESE STEPS BELOW - if you are looking for demo code it can be found in the 2_Analysis folder

Running the analysis

  1. Download this entire repository (you can download as a zip folder using Code -> Download ZIP, or you can use GitHub Desktop).
  2. Open the project CoagulopathyInVaccinated.Rproj in RStudio (when inside the project, you will see its name on the top-right of your RStudio session)
  3. Open and work though the CodeToRun.R file which should be the only file that you need to interact with. Run the lines in the file, adding your database specific information and so on (see comments within the file for instructions). The last line of this file will run the study (source(here("RunStudy.R")).
  4. After running you should then have a zip folder with results to share in your output folder.

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