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Optimizing memory usage #308

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georgiiprovisor opened this issue Mar 5, 2024 · 0 comments
Open

Optimizing memory usage #308

georgiiprovisor opened this issue Mar 5, 2024 · 0 comments

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@georgiiprovisor
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Is it possible to save some intermediate results to reduce memory usage?
I'm using GLnexus for a big project (around 5k WES on test, expecting around 30-35k in total).
We divided genome in 100 +/- equal pieces and run each piece separately from joint step. So we have 5k full gVCFs and 100 multi-sample VCF.
And temporary files for each genome part require a LOT OF storage. Is it possible to optimize these storage usage?

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