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gene_trend plot #148

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yitengfei120011 opened this issue Aug 2, 2024 · 1 comment
Open

gene_trend plot #148

yitengfei120011 opened this issue Aug 2, 2024 · 1 comment

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@yitengfei120011
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Hi, Excuse me what is in the red box in figure scale respectively? On the left side of the rod can be understood as the expression of genes ?
image

@katosh
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katosh commented Aug 9, 2024

The left scale is for the trend line and the right scale is for the cell-specific gene expression values. The two can be very different, especially, when the non-imputed log-count values are used for the cell-specific expression values. This can be achieved by passing None as the position_layer or skipping the argument entirely.

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