diff --git a/.github/workflows/caseologue_curation.yml b/.github/workflows/caseologue_curation.yml new file mode 100644 index 0000000..cea36b8 --- /dev/null +++ b/.github/workflows/caseologue_curation.yml @@ -0,0 +1,36 @@ +name: caseologue curation + +on: [workflow_dispatch] + +jobs: + + upload_edam: + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v2 + - name: download edam + run: wget https://raw.githubusercontent.com/edamontology/edamontology/main/EDAM_dev.owl + - name: upload edam + uses: actions/upload-artifact@v2 + with: + name: input_ontology + path: EDAM_dev.owl + + caseologue: + needs: upload_edam + uses: ./.github/workflows/caseologue_python.yml + with: + edam_path: '../EDAM_dev.owl' + caseologue_options: '-c' + + report: + needs: upload_edam + uses: ./.github/workflows/caseologue_robot_report.yml + with: + edam_path: '../EDAM_dev.owl' + + reason: + needs: upload_edam + uses: ./.github/workflows/caseologue_robot_reason.yml + with: + edam_path: '../EDAM_dev.owl'