pom.xml

<?xml version="1.0" encoding="UTF-8"?>

<project xmlns="http://maven.apache.org/POM/4.0.0"
    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <groupId>org.ehrbase.fhirbridge</groupId>
    <artifactId>fhir-bridge</artifactId>
    <version>1.0.1</version>

    <name>FHIR Bridge</name>

    <properties>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <maven.compiler.source>11</maven.compiler.source>
        <maven.compiler.target>11</maven.compiler.target>
        <skipITs>true</skipITs>
        <commandLineArguments/>
        <!-- Plugins -->
        <checkstyle.version>3.1.1</checkstyle.version>
        <git-code-format-maven-plugin.version>3.0</git-code-format-maven-plugin.version>
        <failsafe.version>2.22.2</failsafe.version>
        <surefire.version>2.22.2</surefire.version>
        <jacoco.version>0.8.5</jacoco.version>
        <!-- Dependencies -->
        <bootstrap.version>4.5.3</bootstrap.version>
        <checker.version>3.5.0</checker.version>
        <commons-codec.version>1.15</commons-codec.version>
        <commons-collections4.version>4.4</commons-collections4.version>
        <commons-io.version>2.8.0</commons-io.version>
        <commons-lang3.version>3.11</commons-lang3.version>
        <commons-text.version>1.9</commons-text.version>
        <ehrbase-sdk.version>develop-SNAPSHOT</ehrbase-sdk.version>
        <error-prone.version>2.3.4</error-prone.version>
        <gson.version>2.8.6</gson.version>
        <guava.version>29.0-jre</guava.version>
        <h2.version>1.4.200</h2.version>
        <hapi-fhir.version>5.2.0</hapi-fhir.version>
        <hikari.version>3.4.3</hikari.version>
        <httpclient.version>4.5.13</httpclient.version>
        <httpcore.version>4.4.13</httpcore.version>
        <ipf.version>3.7.2</ipf.version>
        <jackson.version>2.10.4</jackson.version>
        <javassist.version>3.26.0-GA</javassist.version>
        <junit.version>5.7.0</junit.version>
        <liquibase.version>4.2.0</liquibase.version>
        <micrometer.version>1.5.3</micrometer.version>
        <postgresql.version>42.2.18</postgresql.version>
        <slf4j.version>1.7.30</slf4j.version>
        <spring.version>5.2.8.RELEASE</spring.version>
        <spring-boot.version>2.3.2.RELEASE</spring-boot.version>
        <snakeyaml.version>1.27</snakeyaml.version>
        <stax2.version>4.2</stax2.version>
        <thymeleaf.version>3.0.11.RELEASE</thymeleaf.version>
        <woodstox.version>6.1.1</woodstox.version>
    </properties>

    <profiles>
        <profile>
            <id>circleci</id>
            <properties>
                <commandLineArguments>--logging.level.root=error --logging.level.org.apache.camel=off</commandLineArguments>
            </properties>
        </profile>
    </profiles>

    <build>
        <plugins>
            <!-- TODO: Clarify with @Renaud if it makes sense to keep this plugin along side with git-code-format-maven-plugin -->
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-checkstyle-plugin</artifactId>
                <version>${checkstyle.version}</version>
                <configuration>
                    <configLocation>${project.basedir}/config/checkstyle/ehrbase_checks.xml</configLocation>
                    <consoleOutput>true</consoleOutput>
                    <failsOnError>true</failsOnError>
                </configuration>
                <executions>
                    <execution>
                        <id>validate</id>
                        <phase>validate</phase>
                        <goals>
                            <goal>check</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <!-- https://github.com/google/google-java-format -->
                <!-- https://github.com/Cosium/git-code-format-maven-plugin -->
                <groupId>com.cosium.code</groupId>
                <artifactId>git-code-format-maven-plugin</artifactId>
                <version>${git-code-format-maven-plugin.version}</version>
                <executions>
                    <!-- On commit, format the modified java files -->
                    <execution>
                        <id>install-formatter-hook</id>
                        <goals>
                            <goal>install-hooks</goal>
                        </goals>
                    </execution>
                    <!-- On Maven verify phase, fail if any file (including unmodified) is badly formatted -->
                    <execution>
                        <id>validate-code-format</id>
                        <goals>
                            <goal>validate-code-format</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-maven-plugin</artifactId>
                <version>${spring-boot.version}</version>
                <configuration>
                    <image>
                        <name>ehrbaseorg/${project.artifactId}</name>
                    </image>
                    <wait>1000</wait>
                    <maxAttempts>60</maxAttempts>
                    <excludes>
                        <exclude>
                            <groupId>org.springframework.boot</groupId>
                            <artifactId>spring-boot-configuration-processor</artifactId>
                        </exclude>
                    </excludes>
                </configuration>
                <executions>
                    <execution>
                        <goals>
                            <goal>build-info</goal>
                            <goal>repackage</goal>
                        </goals>
                    </execution>
                    <execution>
                        <id>pre-integration-test</id>
                        <goals>
                            <goal>start</goal>
                        </goals>
                        <configuration>
                            <skip>${skipITs}</skip>
                            <commandlineArguments>${commandLineArguments}</commandlineArguments>
                        </configuration>
                    </execution>
                    <execution>
                        <id>post-integration-test</id>
                        <goals>
                            <goal>stop</goal>
                        </goals>
                        <configuration>
                            <skip>${skipITs}</skip>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-surefire-plugin</artifactId>
                <version>${surefire.version}</version>
                <configuration>
                    <!-- SETS THE VM ARGUMENT LINE USED WHEN UNIT TESTS ARE RUN. -->
                    <argLine>${surefireArgLine}</argLine>
                </configuration>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-failsafe-plugin</artifactId>
                <version>${failsafe.version}</version>
                <executions>
                    <execution>
                        <goals>
                            <goal>integration-test</goal>
                            <goal>verify</goal>
                        </goals>
                        <configuration>
                            <!-- SETS THE VM ARGUMENT LINE USED WHEN INTEGRATION TESTS ARE RUN. -->
                            <argLine>${failsafeArgLine}</argLine>
                            <includes>
                                <include>**/*IT.java</include>
                            </includes>
                        </configuration>
                    </execution>
                </executions>
                <configuration>
                    <additionalClasspathElements>
                        <additionalClasspathElement>${project.build.outputDirectory}</additionalClasspathElement>
                    </additionalClasspathElements>
                </configuration>
            </plugin>
            <plugin>
                <groupId>org.jacoco</groupId>
                <artifactId>jacoco-maven-plugin</artifactId>
                <version>${jacoco.version}</version>
                <executions>

                    <!-- SET ARG LINE PROPERTY FOR SUREFIRE -->
                    <execution>
                        <id>agent for unit tests</id>
                        <goals>
                            <goal>prepare-agent</goal>
                        </goals>
                        <configuration>
                            <propertyName>surefireArgLine</propertyName>
                        </configuration>
                    </execution>

                    <!-- SET ARG LINE PROPERTY FOR FAILSAFE -->
                    <execution>
                        <id>agent for integration tests</id>
                        <goals>
                            <goal>prepare-agent-integration</goal>
                        </goals>
                        <configuration>
                            <propertyName>failsafeArgLine</propertyName>
                        </configuration>
                    </execution>
                    <execution>
                        <id>default-report</id>
                        <phase>verify</phase>
                        <goals>
                            <goal>report</goal>
                        </goals>
                    </execution>

                    <!-- FAIL BUILD IF RULES NOT MET! -->
                    <!-- <execution>
                        <id>default-check</id>
                        <goals>
                            <goal>check</goal>
                        </goals>
                        <configuration>
                            <rules>
                                <rule>
                                    <element>BUNDLE</element>
                                    <limits>
                                        <limit>
                                            <counter>INSTRUCTION</counter>
                                            <value>COVEREDRATIO</value>
                                            <minimum>0.50</minimum>
                                        </limit>
                                        <limit>
                                            <counter>CLASS</counter>
                                            <value>MISSEDCOUNT</value>
                                            <maximum>0</maximum>
                                        </limit>
                                    </limits>
                                </rule>
                            </rules>
                        </configuration>
                    </execution> -->
                </executions>
            </plugin>
        </plugins>
    </build>

    <dependencies>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-web</artifactId>
            <version>${spring-boot.version}</version>
        </dependency>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-actuator</artifactId>
            <version>${spring-boot.version}</version>
        </dependency>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-cache</artifactId>
            <version>${spring-boot.version}</version>
        </dependency>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-configuration-processor</artifactId>
            <version>${spring-boot.version}</version>
            <optional>true</optional>
        </dependency>
        <dependency>
            <groupId>org.openehealth.ipf.boot</groupId>
            <artifactId>ipf-fhir-r4-spring-boot-starter</artifactId>
            <version>${ipf.version}</version>
        </dependency>
        <dependency>
            <groupId>org.openehealth.ipf.boot</groupId>
            <artifactId>ipf-atna-spring-boot-starter</artifactId>
            <version>${ipf.version}</version>
        </dependency>
        <dependency>
            <groupId>org.openehealth.ipf.platform-camel</groupId>
            <artifactId>ipf-platform-camel-ihe-fhir-core</artifactId>
            <version>${ipf.version}</version>
        </dependency>
        <dependency>
            <groupId>ca.uhn.hapi.fhir</groupId>
            <artifactId>hapi-fhir-jpaserver-base</artifactId>
            <version>${hapi-fhir.version}</version>
            <exclusions>
                <exclusion>
                    <groupId>com.zaxxer</groupId>
                    <artifactId>HikariCP-java7</artifactId>
                </exclusion>
            </exclusions>
        </dependency>
        <dependency>
            <groupId>org.webjars</groupId>
            <artifactId>bootstrap</artifactId>
            <version>${bootstrap.version}</version>
        </dependency>
        <dependency>
            <groupId>jakarta.xml.bind</groupId>
            <artifactId>jakarta.xml.bind-api</artifactId>
            <version>2.3.3</version>
        </dependency>
        <dependency>
            <groupId>com.h2database</groupId>
            <artifactId>h2</artifactId>
            <version>${h2.version}</version>
        </dependency>
        <dependency>
            <groupId>com.zaxxer</groupId>
            <artifactId>HikariCP</artifactId>
            <version>${hikari.version}</version>
        </dependency>
        <dependency>
            <groupId>com.github.ehrbase</groupId>
            <artifactId>openEHR_SDK</artifactId>
            <version>${ehrbase-sdk.version}</version>
            <exclusions>
                <exclusion>
                    <groupId>org.slf4j</groupId>
                    <artifactId>slf4j-simple</artifactId>
                </exclusion>
            </exclusions>
        </dependency>
        <dependency>
            <groupId>org.postgresql</groupId>
            <artifactId>postgresql</artifactId>
            <version>${postgresql.version}</version>
        </dependency>
        <dependency>
            <groupId>org.liquibase</groupId>
            <artifactId>liquibase-core</artifactId>
            <version>${liquibase.version}</version>
        </dependency>
        <!-- Test Dependencies-->
        <dependency>
            <groupId>org.junit.jupiter</groupId>
            <artifactId>junit-jupiter</artifactId>
            <version>${junit.version}</version>
            <scope>test</scope>
        </dependency>
    </dependencies>

    <dependencyManagement>
        <dependencies>
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter</artifactId>
                <version>${spring-boot.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-aop</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-beans</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-context</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-context-support</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-core</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-expression</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-orm</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-tx</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-web</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>org.springframework</groupId>
                <artifactId>spring-webmvc</artifactId>
                <version>${spring.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-annotations</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-core</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-databind</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.datatype</groupId>
                <artifactId>jackson-datatype-jsr310</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>org.slf4j</groupId>
                <artifactId>slf4j-api</artifactId>
                <version>${slf4j.version}</version>
            </dependency>
            <dependency>
                <groupId>org.slf4j</groupId>
                <artifactId>jcl-over-slf4j</artifactId>
                <version>${slf4j.version}</version>
            </dependency>
            <dependency>
                <groupId>commons-codec</groupId>
                <artifactId>commons-codec</artifactId>
                <version>${commons-codec.version}</version>
            </dependency>
            <dependency>
                <groupId>org.apache.commons</groupId>
                <artifactId>commons-collections4</artifactId>
                <version>${commons-collections4.version}</version>
            </dependency>
            <dependency>
                <groupId>commons-io</groupId>
                <artifactId>commons-io</artifactId>
                <version>${commons-io.version}</version>
            </dependency>
            <dependency>
                <groupId>org.apache.commons</groupId>
                <artifactId>commons-lang3</artifactId>
                <version>${commons-lang3.version}</version>
            </dependency>
            <dependency>
                <groupId>org.apache.commons</groupId>
                <artifactId>commons-text</artifactId>
                <version>${commons-text.version}</version>
            </dependency>
            <dependency>
                <groupId>io.micrometer</groupId>
                <artifactId>micrometer-core</artifactId>
                <version>${micrometer.version}</version>
            </dependency>
            <dependency>
                <groupId>org.javassist</groupId>
                <artifactId>javassist</artifactId>
                <version>${javassist.version}</version>
            </dependency>
            <dependency>
                <groupId>org.thymeleaf</groupId>
                <artifactId>thymeleaf</artifactId>
                <version>${thymeleaf.version}</version>
            </dependency>
            <dependency>
                <groupId>org.apache.httpcomponents</groupId>
                <artifactId>httpclient</artifactId>
                <version>${httpclient.version}</version>
            </dependency>
            <dependency>
                <groupId>org.apache.httpcomponents</groupId>
                <artifactId>httpcore</artifactId>
                <version>${httpcore.version}</version>
            </dependency>
            <dependency>
                <groupId>org.yaml</groupId>
                <artifactId>snakeyaml</artifactId>
                <version>${snakeyaml.version}</version>
            </dependency>
            <dependency>
                <groupId>com.google.errorprone</groupId>
                <artifactId>error_prone_annotations</artifactId>
                <version>${error-prone.version}</version>
            </dependency>
            <dependency>
                <groupId>com.google.code.gson</groupId>
                <artifactId>gson</artifactId>
                <version>${gson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.woodstox</groupId>
                <artifactId>woodstox-core</artifactId>
                <version>${woodstox.version}</version>
            </dependency>
            <dependency>
                <groupId>com.google.guava</groupId>
                <artifactId>guava</artifactId>
                <version>${guava.version}</version>
            </dependency>
            <dependency>
                <groupId>org.codehaus.woodstox</groupId>
                <artifactId>stax2-api</artifactId>
                <version>${stax2.version}</version>
            </dependency>
            <dependency>
                <groupId>org.checkerframework</groupId>
                <artifactId>checker-qual</artifactId>
                <version>${checker.version}</version>
            </dependency>
        </dependencies>
    </dependencyManagement>

    <repositories>
        <repository>
            <id>jitpack.io</id>
            <url>https://jitpack.io</url>
        </repository>
    </repositories>
</project>