From e1832b508b393eb120d2037d6d63a52aab3e9ac1 Mon Sep 17 00:00:00 2001
From: Malte Londschien <malte@londschien.de>
Date: Thu, 4 Jan 2024 16:45:34 +0100
Subject: [PATCH] Add diffs of mimic-iv.

---
 inst/extdata/config/data-sources.json | 56 ++++++++++++++++++++++++++-
 1 file changed, 54 insertions(+), 2 deletions(-)

diff --git a/inst/extdata/config/data-sources.json b/inst/extdata/config/data-sources.json
index ff8f94f3..02689f77 100644
--- a/inst/extdata/config/data-sources.json
+++ b/inst/extdata/config/data-sources.json
@@ -7136,6 +7136,10 @@
           "hospital_expire_flag": {
             "name": "hospital_expire_flag",
             "spec": "col_integer"
+          },
+          "admit_provider_id": {
+            "name": "admit_provider_id",
+            "spec": "col_character"
           }
         }
       },
@@ -7573,6 +7577,10 @@
             "name": "storetime",
             "spec": "col_datetime",
             "format": "%Y-%m-%d %H:%M:%S"
+          },
+          "enter_provider_id": {
+            "name": "enter_provider_id",
+            "spec": "col_character"
           }
         }
       },
@@ -7682,6 +7690,10 @@
           "comments": {
             "name": "comments",
             "spec": "col_character"
+          },
+          "order_provider_id": {
+            "name": "order_provider_id",
+            "spec": "col_character"
           }
         },
         "partitioning": {
@@ -7797,6 +7809,10 @@
           "comments": {
             "name": "comments",
             "spec": "col_character"
+          },
+          "order_provider_id": {
+            "name": "order_provider_id",
+            "spec": "col_character"
           }
         }
       },
@@ -8012,6 +8028,10 @@
         "partitioning": {
           "col": "subject_id",
           "breaks": [12017899, 13999829, 15979442, 17994364]
+        },
+        "order_provider_id": {
+            "name": "order_provider_id",
+            "spec": "col_character"
         }
       },
       "prescriptions": {
@@ -8093,6 +8113,14 @@
           "route": {
             "name": "route",
             "spec": "col_character"
+          },
+          "order_provider_id": {
+            "name": "order_provider_id",
+            "spec": "col_character"
+          },
+          "formulary_drug_cd": {
+            "name": "formulary_drug_cd",
+            "spec": "col_character"
           }
         }
       },
@@ -8215,6 +8243,10 @@
           "warning": {
             "name": "warning",
             "spec": "col_integer"
+          },
+          "caregiver_id": {
+            "name": "caregiver_id",
+            "spec": "col_integer"
           }
         },
         "partitioning": {
@@ -8269,6 +8301,10 @@
           "warning": {
             "name": "warning",
             "spec": "col_integer"
+          },
+          "caregiver_id": {
+            "name": "caregiver_id",
+            "spec": "col_integer"
           }
         }
       },
@@ -8385,6 +8421,10 @@
             "name": "stay_id",
             "spec": "col_integer"
           },
+          "caregiver_id": {
+            "name": "caregiver_id",
+            "spec": "col_integer"
+          },
           "starttime": {
             "name": "starttime",
             "spec": "col_datetime",
@@ -8525,6 +8565,10 @@
           "valueuom": {
             "name": "valueuom",
             "spec": "col_character"
+          },
+          "caregiver_id": {
+            "name": "caregiver_id",
+            "spec": "col_integer"
           }
         }
       },
@@ -8645,6 +8689,10 @@
           "originalrate": {
             "name": "originalrate",
             "spec": "col_double"
+          },
+          "caregiver_id": {
+            "name": "caregiver_id",
+            "spec": "col_integer"
           }
         }
       },
@@ -8653,7 +8701,7 @@
         "defaults": {
           "index_var": "chartdate",
           "val_var": "result_value",
-          "time_vars": "chartdate"
+          "time_vars": ["chartdate"]
         },
         "num_rows": 6439169,
         "cols": {
@@ -8681,7 +8729,7 @@
         }
       },
       "caregiver": {
-        "files": "hosp/caregiver.csv.gz",
+        "files": "icu/caregiver.csv.gz",
         "defaults": [],
         "num_rows": 15468,
         "cols": {
@@ -8724,6 +8772,10 @@
             "name": "stay_id",
             "spec": "col_integer"
           },
+          "caregiver_id": {
+            "name": "caregiver_id",
+            "spec": "col_integer"
+          },
           "starttime": {
             "name": "starttime",
             "spec": "col_datetime",