Skip to content

eugeniumegherea/MRI-Volume-Slice

 
 

Repository files navigation

MRI Volume Slice

A 3 axis viewer or 3d volumes right in the broswer. Currently supports loading in Nifti (.nii) files. When you click and drag on any of the 3 axis, the other two axis update to display a slice at the coordinates of the mouse.

3 view MRI display

This kind of three axis viewer is common in neuro science, but in the spirit of accessibility, open-source and open-science; here is an open-source viewer on the universal platform (the web browser).

At the moment this is very much a hobby project of mine, so you can expect bugs. Feel free to contact me.

contributions and development

If you're not a developer but have ideas for how this can be used, or ways to extend it's functionality feel free to let me know 😁 🙌

Setup for seasoned devs

git clone . . . 
npm install
parcel index.html

detailed setup

You will need to install git and node, go to the each of their websites to get them running on your OS.

Clone this repo

git clone https://github.com/Irev-Dev/MRI-Volume-Slice.git

Install parcel globally

npm install -g parcel-bundler

Install dependencies

npm install

Use parcel to build the project

parcel index.html

Parcel will also setup a live sever, so you can view the project by going to local host port 1234 (by default) ie http://127.0.0.1:1234/. It will also live update any changes you make to the files.

About

Tools for view MRI Volumes in the browser

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages

  • JavaScript 94.0%
  • HTML 6.0%