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pyproject.toml
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pyproject.toml
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[tool.poetry]
name = "glytrait"
version = "0.2.0"
description = "A tool for calculating derived traits for N-glycome"
authors = ["fubin1999 <[email protected]>"]
readme = "README.md"
license = "MIT"
repository = "https://github.com/fubin1999/glytrait"
keywords = ["bioinformatics", "glycomics", "biology"]
[[tool.poetry.source]]
name = "aliyun"
url = "http://mirrors.aliyun.com/pypi/simple"
priority = "default"
[tool.poetry.dependencies]
python = ">=3.10,<3.13"
glypy = "^1.0.11"
attrs = "^23.1.0"
pandas = "^2.0.1"
numpy = "^1.25.2"
openpyxl = "^3.1.2"
click = "^8.1.3"
emoji = "^2.7.0"
pingouin = "^0.5.3"
[tool.poetry.group.streamlit]
optional = true
[tool.poetry.group.streamlit.dependencies]
streamlit = "^1.25.0"
watchdog = "^4.0.0"
[tool.poetry.group.dev.dependencies]
pytest = "^7.3.1"
coverage = "^7.2.6"
pytest-mock = "^3.10.0"
mypy = "^1.7.1"
pandas-stubs = "^2.1.1.230928"
black = "^24.1.1"
hypothesis = "^6.100.1"
pytest-cov = "^5.0.0"
[tool.poetry.scripts]
glytrait = "glytrait.cli:cli"
[tool.mypy]
[[tool.mypy.overrides]]
module = "scikit-learn"
ignore_missing_imports = true
[[tool.mypy.overrides]]
module = "pingouin"
ignore_missing_imports = true
[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"
[tool.pytest.ini_options]
filterwarnings = [
"ignore::DeprecationWarning",
]