Update Python dependencies #289
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name: Mulled Unit Tests | |
on: | |
push: | |
paths-ignore: | |
- 'client/**' | |
- 'doc/**' | |
- 'lib/galaxy_test/selenium/**' | |
pull_request: | |
paths-ignore: | |
- 'client/**' | |
- 'doc/**' | |
- 'lib/galaxy_test/selenium/**' | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test: | |
name: Test | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ['3.8'] | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
path: 'galaxy root' | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache: 'pip' | |
cache-dependency-path: 'galaxy root/requirements.txt' | |
- name: Get full Python version | |
id: full-python-version | |
shell: bash | |
run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT | |
- name: Cache tox env | |
uses: actions/cache@v4 | |
with: | |
path: .tox | |
key: tox-cache-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }}-mulled | |
- name: Install Apptainer's singularity | |
uses: eWaterCycle/setup-apptainer@v2 | |
- name: Install tox | |
run: pip install tox | |
- name: Run tests | |
run: tox -e mulled | |
working-directory: 'galaxy root' | |
- uses: actions/upload-artifact@v4 | |
if: failure() | |
with: | |
name: Mulled unit test results (${{ matrix.python-version }}) | |
path: 'galaxy root/run_unit_tests.html' |