diff --git a/tools/taxonomy_filter_refseq/taxonomy_filter_refseq.xml b/tools/taxonomy_filter_refseq/taxonomy_filter_refseq.xml
index 473002d6d59..a4f82a58d16 100644
--- a/tools/taxonomy_filter_refseq/taxonomy_filter_refseq.xml
+++ b/tools/taxonomy_filter_refseq/taxonomy_filter_refseq.xml
@@ -1,7 +1,7 @@
 <tool id="taxonomy_filter_refseq" name="Filter RefSeq by taxonomy" version="@TOOL_VERSION@+galaxy0">
     <description>Only retain sequences that are descendants of a given taxonomic node.</description>
     <macros>
-        <token name="@TOOL_VERSION@">0.3.0</token>
+        <token name="@TOOL_VERSION@">1.0.7</token>
     </macros>
     <edam_topics>
         <edam_topic>topic_0091</edam_topic>