Makefile

GALAXY_SERVER := https://usegalaxy.*
TOOLSET := usegalaxy.org


help:
	@egrep '^[a-zA-Z_-]+:.*?## .*$$' $(MAKEFILE_LIST) | awk 'BEGIN {FS = ":.*?## "}; {printf "\033[94m%-16s\033[0m %s\n", $$1, $$2}'

lint: ## Lint all yaml files
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/fix_lockfile.py
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 -I{} pykwalify -d '{}' -s .schema.yml

lint-no-deps:
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/fix_lockfile.py --no-install-repository-dependencies --no-install-resolver-dependencies
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 -I{} pykwalify -d '{}' -s .schema.yml

fix: ## Fix all lockfiles and add any missing revisions
	@# Generates the lockfile or updates it if it is missing tools
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/fix_lockfile.py
	@# --without says only add those hashes for those missing hashes (zB new tools)
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/update_tool.py --without

fix-no-deps:
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml  | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/fix_lockfile.py --no-install-repository-dependencies --no-install-resolver-dependencies
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/update_tool.py --without

#install:
	#@echo "Installing any updated versions of $<"
	#@-shed-tools install --toolsfile $< --galaxy $(GALAXY_SERVER) --api_key $(GALAXY_API_KEY)


update-trusted: ## Run the update script for a subset of repos
	@# Missing --without, so this updates all tools in the file.
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/update_tool.py --owner $(OWNER)

update-all: ## Run the update script for all repos
	find ./$(TOOLSET) -name '*.yml' ! -path .//.schema.yml | grep '^\./[^/]*/' | xargs -n 1 -P 8 python scripts/update_tool.py

.PHONY: lint update-trusted update-all help fix