diff --git a/WholeGenomeSingleSampleQc.wdl b/WholeGenomeSingleSampleQc.wdl index 6e8278e..5f5b2cf 100644 --- a/WholeGenomeSingleSampleQc.wdl +++ b/WholeGenomeSingleSampleQc.wdl @@ -171,5 +171,6 @@ workflow SingleSampleQc { File? hs_metrics = CollectHsMetrics.metrics File input_bam_md5 = CalculateChecksum.md5 + File input_bam_index = BuildBamIndex.bam_index } }