From e33338ff2b22bc48be7b97cf17ca671f3ae08777 Mon Sep 17 00:00:00 2001 From: Lindsey Heagy Date: Fri, 29 Nov 2024 09:41:33 -0800 Subject: [PATCH 1/3] add small extension to get the edit on github button working --- _ext/edit_on_github.py | 42 ++++++++++++++++++++++++++++++++++++++++++ conf.py | 22 ++++++++++++++-------- 2 files changed, 56 insertions(+), 8 deletions(-) create mode 100644 _ext/edit_on_github.py diff --git a/_ext/edit_on_github.py b/_ext/edit_on_github.py new file mode 100644 index 00000000..6c8aca1d --- /dev/null +++ b/_ext/edit_on_github.py @@ -0,0 +1,42 @@ +""" +Sphinx extension to add ReadTheDocs-style "Edit on GitHub" links to the +sidebar. + +Loosely based on https://github.com/astropy/astropy/pull/347 +""" + +import os +import warnings + + +__licence__ = 'BSD (3 clause)' + + +def get_github_url(app, view, path): + return 'https://github.com/{project}/{view}/{branch}/{path}'.format( + project=app.config.edit_on_github_project, + view=view, + branch=app.config.edit_on_github_branch, + path=path) + + +def html_page_context(app, pagename, templatename, context, doctree): + if templatename != 'page.html': + return + + if not app.config.edit_on_github_project: + warnings.warn("edit_on_github_project not specified") + return + + path = os.path.relpath(doctree.get('source'), app.builder.srcdir) + show_url = get_github_url(app, 'blob', path) + edit_url = get_github_url(app, 'edit', path) + + # context['show_on_github_url'] = show_url + context['edit_on_github_url'] = edit_url + + +def setup(app): + app.add_config_value('edit_on_github_project', '', True) + app.add_config_value('edit_on_github_branch', 'master', True) + app.connect('html-page-context', html_page_context) diff --git a/conf.py b/conf.py index 2953bcba..6ff2d819 100644 --- a/conf.py +++ b/conf.py @@ -41,6 +41,7 @@ 'sphinxcontrib.bibtex', 'sphinx_rtd_theme', 'matplotlib.sphinxext.plot_directive', + 'edit_on_github', 'purpose', 'question', 'geosciapp', @@ -83,7 +84,7 @@ # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. -language = None +language = "en" # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: @@ -156,6 +157,11 @@ # number figures numfig = True +# -- Edit on Github Extension --------------------------------------------- + +edit_on_github_project = 'geoscixyz/em' +edit_on_github_branch = 'main' + # -- Options for HTML output ---------------------------------------------- @@ -164,13 +170,13 @@ import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' -html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] -html_context = { - 'display_github': True, - 'github_user': 'geoscixyz', - 'github_repo': 'em', - 'github_version': 'main' -} +# html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] +# html_context = { +# 'display_github': True, +# 'github_user': 'geoscixyz', +# 'github_repo': 'em', +# 'github_version': 'main' +# } # The name for this set of Sphinx documents. If None, it defaults to # " v documentation". html_title = 'Electromagnetic Geophysics' From 3634e16a1c4ed2a3ad74e071f4bd6c815d318ecc Mon Sep 17 00:00:00 2001 From: Lindsey Heagy Date: Fri, 29 Nov 2024 10:26:54 -0800 Subject: [PATCH 2/3] update links --- README.md | 2 +- conf.py | 4 +++- content/case_histories/albany/index.rst | 8 ++++---- content/case_histories/aspen/index.rst | 8 ++++---- content/case_histories/barents_sea/index.rst | 2 +- content/case_histories/bookpurnong/index.rst | 6 +++--- content/case_histories/do27do18tkc/index.rst | 4 ++-- .../case_histories/do27do18tkc/processing.rst | 2 +- content/case_histories/do27do18tkc/survey.rst | 2 +- content/case_histories/furggwanghorn/index.rst | 4 ++-- content/case_histories/lalor/index.rst | 16 ++++++++-------- content/case_histories/noranda/index.rst | 6 +++--- content/case_histories/norsminde/index.rst | 4 ++-- content/case_histories/red_sea/index.rst | 6 +++--- content/case_histories/sagd/index.rst | 6 +++--- content/case_histories/saurashtra/index.rst | 10 +++++----- content/case_histories/wadi_sahba/index.rst | 6 +++--- content/case_histories/westplains/index.rst | 8 ++++---- contributors.json | 11 +++++------ index.rst | 4 ++-- 20 files changed, 60 insertions(+), 59 deletions(-) diff --git a/README.md b/README.md index bcba0bba..da36e3bd 100644 --- a/README.md +++ b/README.md @@ -3,6 +3,6 @@ [![DOI](https://zenodo.org/badge/42916308.svg)](https://zenodo.org/badge/latestdoi/42916308) This repository is the source for the open-textbook EM-GeoSci: https://em.geosci.xyz. This was the main textbook-resource used -for the [Society of Exploration Geophysics 2017 Distinguished Instructor Short Course](https://seg.org/Education/Courses/DISC/2017-DISC-Doug-Oldenburg) +for the [Society of Exploration Geophysics 2017 Distinguished Instructor Short Course](https://doi.org/10.1190/tle40020140.1) diff --git a/conf.py b/conf.py index 6ff2d819..cf229861 100644 --- a/conf.py +++ b/conf.py @@ -116,13 +116,15 @@ 'https://gif.eos.ubc.ca/sites/default/files/Yang16.pdf', 'https://www.google.ca/url?sa=t&rct=j&q=&esrc=s&source=web&cd=2&ved=0ahUKEwjy65rOo8fRAhVJ1WMKHYO7CJAQFggkMAE&url=http%3A%2F%2Fwww.dmec.ca%2FDMEC%2Fmedia%2FDocuments%2FLalor%2520Symposium%2FLalor_Symposium_Oct-2014_Handout.pdf&usg=AFQjCNHYYoQbCDs7vftzMyfuY28XUkTItQ&sig2=KDwe8n7CRvmEvAOAcKh5Zg&cad=rja', 'https://gif.eos.ubc.ca/sites/default/files/McMillan_parametric.pdf', - 'http://seg.org', + 'https://seg.org', 'http://library.seg.org/doi/', 'http://www.publish.csiro.au/EX/pdf/ASEG2016ab212', 'https://www.onepetro.org/conference-paper/SEG-2012-1478', 'https://doi.org/*', 'http://canada.debeersgroup.com/* ', 'https://www.sensoft.ca', + 'https://library.seg.org/page/policies/permissions', + 'https://www.tandfonline.com/journals/texg20' ] linkcheck_retries = 3 linkcheck_timeout = 900 diff --git a/content/case_histories/albany/index.rst b/content/case_histories/albany/index.rst index f58dbc41..6f42a70f 100644 --- a/content/case_histories/albany/index.rst +++ b/content/case_histories/albany/index.rst @@ -15,13 +15,13 @@ Albany **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - - Jean M. Legault, Josh Lymburner, Kevin Ralph, Peter Wood, Marta Orta, Alexander Prikhodko, and Nasreddine Bournas (2015) The Albany graphite discovery - a airborne and ground time-domain EM. SEG Technical Program Expanded Abstracts 2015: pp. 2056-2060. `https://doi.org/10.1190/segam2015-5908480.1 `__ + - Jean M. Legault, Josh Lymburner, Kevin Ralph, Peter Wood, Marta Orta, Alexander Prikhodko, and Nasreddine Bournas (2015) The Albany graphite discovery - a airborne and ground time-domain EM. SEG Technical Program Expanded Abstracts 2015: pp. 2056-2060. `https://doi.org/10.1190/segam2015-5908480.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ and `Geotech Ltd. `__ for permission to reproduce figures and adapt text from the source material. This case history was adapted from the expanded abstract `"Airborne and Ground Time-Domain EM results from the Albany Graphite Discovery" `__. +.. Thanks to the `Society of Exploration Geophysicists `__ and `Geotech Ltd. `__ for permission to reproduce figures and adapt text from the source material. This case history was adapted from the expanded abstract `"Airborne and Ground Time-Domain EM results from the Albany Graphite Discovery" `__. **Abstract** diff --git a/content/case_histories/aspen/index.rst b/content/case_histories/aspen/index.rst index d2d14456..54a93138 100644 --- a/content/case_histories/aspen/index.rst +++ b/content/case_histories/aspen/index.rst @@ -14,13 +14,13 @@ Aspen **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - - Sarah Devriese and Douglas Oldenburg (2016) From exploration to reclamation: Using EM methods at SAGD sites in the Athabasca oil sands. SEG Technical Program Expanded Abstracts 2016: pp. 965-970. `https://doi.org/10.1190/segam2016-13842507.1 `__ + - Sarah Devriese and Douglas Oldenburg (2016) From exploration to reclamation: Using EM methods at SAGD sites in the Athabasca oil sands. SEG Technical Program Expanded Abstracts 2016: pp. 965-970. `https://doi.org/10.1190/segam2016-13842507.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material. This case study is based on the extended abstract `"From exploration to reclamation: using EM methods at SAGD sites in the Athabasca oil sands" `__ :cite:`DevrieseOldenburg2016a`. +.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material. This case study is based on the extended abstract `"From exploration to reclamation: using EM methods at SAGD sites in the Athabasca oil sands" `__ :cite:`DevrieseOldenburg2016a`. **Abstract** diff --git a/content/case_histories/barents_sea/index.rst b/content/case_histories/barents_sea/index.rst index 706f720c..fd1aac49 100644 --- a/content/case_histories/barents_sea/index.rst +++ b/content/case_histories/barents_sea/index.rst @@ -23,7 +23,7 @@ Barents Sea **Special Thanks** -Thank to `Rock Solid Images `__ for for permission to +Thank to `Rock Solid Images `__ for for permission to reproduce figures and adapt text from the source material. This case history has been taken from the paper `"Predicting resevoir properties using CSEM, pre-stack seismic and well log data: case study in Hoop area, Barents Sea, Norway" `__ . diff --git a/content/case_histories/bookpurnong/index.rst b/content/case_histories/bookpurnong/index.rst index 8d37d0ac..8356d6fa 100644 --- a/content/case_histories/bookpurnong/index.rst +++ b/content/case_histories/bookpurnong/index.rst @@ -14,14 +14,14 @@ Bookpurnong **Special Thanks** -Thanks to the `Exploration Geophysics `__ for permission to reproduce figures and adapt text from: +Thanks to the `Exploration Geophysics `__ for permission to reproduce figures and adapt text from: - Andrea Viezzoli, Esben Auken, and Tim Munday (2009). ”Spatially constrained inversion for quasi 3D modelling of airborne electromagnetic data – an application for environmental assessment in the Lower Murray Region of South Australia.” Exploration Geophysics, 40(2), 173-183. `https://doi.org/10.1071/EG08027 `__ -This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ and SkyTEM for permission to reproduce figures and adapt text from the source material. This case history is based upon two articles: +.. Thanks to the `Society of Exploration Geophysicists `__ and SkyTEM for permission to reproduce figures and adapt text from the source material. This case history is based upon two articles: .. - `Spatially constrained inversion for quasi 3D modelling of airborne electromagnetic data – an application for environmental assessment in the Lower Murray Region of South Australia `_ by Viezzoli, Auken and Munday :cite:`viezzoli2009` and .. - `Accurate quasi 3D versus practical full 3D inversion of AEM data – the Bookpurnong case study `_ by Viezzoli, Munday, Auken and Christiansen :cite:`viezzoli2010`. diff --git a/content/case_histories/do27do18tkc/index.rst b/content/case_histories/do27do18tkc/index.rst index e9dc7609..46f08dd6 100644 --- a/content/case_histories/do27do18tkc/index.rst +++ b/content/case_histories/do27do18tkc/index.rst @@ -22,13 +22,13 @@ DO-27/DO-18 (TKC) **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Sarah G. R. Devriese, Kristofer Davis, and Douglas W. Oldenburg (2017). ”Inversion of airborne geophysics over the DO-27/DO-18 kimberlites — Part 1: Potential fields.” Interpretation, 5(3), T299-T311. `https://doi.org/10.1190/INT-2016-0142.1 `__ - Dominique Fournier, Seogi Kang, Michael S. McMillan, and Douglas W. Oldenburg (2017). ”Inversion of airborne geophysics over the DO-27/DO-18 kimberlites — Part 2: Electromagnetics.” Interpretation, 5(3), T313-T325. `https://doi.org/10.1190/INT-2016-0140.1 `__ - Seogi Kang, Dominique Fournier, and Douglas W. Oldenburg (2017). ”Inversion of airborne geophysics over the DO-27/DO-18 kimberlites — Part 3: Induced polarization.” Interpretation, 5(3), T327-T340. `https://doi.org/10.1190/INT-2016-0141.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. **Abstract** diff --git a/content/case_histories/do27do18tkc/processing.rst b/content/case_histories/do27do18tkc/processing.rst index abc1ab0d..317a1606 100644 --- a/content/case_histories/do27do18tkc/processing.rst +++ b/content/case_histories/do27do18tkc/processing.rst @@ -189,7 +189,7 @@ We note the following: -.. _MAG3D: http://mag3d.readthedocs.io/en/latest/ +.. _MAG3D: https://mag3d.readthedocs.io/ Frequency-Domain EM diff --git a/content/case_histories/do27do18tkc/survey.rst b/content/case_histories/do27do18tkc/survey.rst index 657d54df..53409363 100644 --- a/content/case_histories/do27do18tkc/survey.rst +++ b/content/case_histories/do27do18tkc/survey.rst @@ -14,7 +14,7 @@ review the acquisition configuration of 5 of these surveys. All data used in this study were converted from their native coordinate system to the NAD27-UTM 12N (`EPSG 26712`_) projection prior to processing. -.. _EPSG 26712: http://spatialreference.org/ref/epsg/nad27-utm-zone-12n/ +.. _EPSG 26712: https://spatialreference.org/ref/epsg/26712/ | | diff --git a/content/case_histories/furggwanghorn/index.rst b/content/case_histories/furggwanghorn/index.rst index 9efe59eb..2c6c2c49 100644 --- a/content/case_histories/furggwanghorn/index.rst +++ b/content/case_histories/furggwanghorn/index.rst @@ -20,11 +20,11 @@ Furggwanghorn **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Kaspar Merz, Hansruedi Maurer, Lasse Rabenstein, Thomas Buchli, Sarah M. Springman, and Matthias Zweifel (2016). ”Multidisciplinary geophysical investigations over an alpine rock glacier.” GEOPHYSICS, 81(1), WA147-WA157. `https://doi.org/10.1190/geo2015-0157.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. **Abstract** diff --git a/content/case_histories/lalor/index.rst b/content/case_histories/lalor/index.rst index 1ba351b2..bcd5c2a7 100644 --- a/content/case_histories/lalor/index.rst +++ b/content/case_histories/lalor/index.rst @@ -10,17 +10,17 @@ Lalor .. topic :: Prelude - This case history follows the use of airborne and ground-based TDEM surveys to locate and characterize a deeply buried very massive sulphide deposit in the Flin Flon Greenbelt, Manitoba/Saskatchewan, Canada. + This case history follows the use of airborne and ground-based TDEM surveys to locate and characterize a deeply buried very massive sulphide deposit in the Flin Flon Greenbelt, Manitoba/Saskatchewan, Canada. **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - - Yang Dikun and Oldenburg Douglas W. (2017). ”3D inversion of total magnetic intensity data for time-domain EM at the Lalor massive sulphide deposit.” Exploration Geophysics, 48(2), 110-123. `https://doi.org/10.1071/EG15070 `__ + - Yang Dikun and Oldenburg Douglas W. (2017). ”3D inversion of total magnetic intensity data for time-domain EM at the Lalor massive sulphide deposit.” Exploration Geophysics, 48(2), 110-123. `https://doi.org/10.1071/EG15070 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material. This case history was adapted from `"3D inversion of total magnetic intensity data for time-domain EM at the Lalor massive sulphide deposit" `__ (:cite:`yangoldenburg2016`) and `"Mine scale description of the mineralization at the Lalor deposit, Snow Lake, Manitoba, Canada" `__ (:cite:`Taylor2014`). +.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material. This case history was adapted from `"3D inversion of total magnetic intensity data for time-domain EM at the Lalor massive sulphide deposit" `__ (:cite:`yangoldenburg2016`) and `"Mine scale description of the mineralization at the Lalor deposit, Snow Lake, Manitoba, Canada" `__ (:cite:`Taylor2014`). **Abstract** @@ -30,15 +30,15 @@ The material presented here has been modified from the SEG-published version and :name: lalor_thumbnail_index -.. - The Lalor deposit is a volcanogenic massive sulphide that is characterised as a stack of conductive ore lenses buried more than 600 m deep. -.. - Helicopter sub-audio magnetics (HeliSAM) survey using a ground large transmitter loop and an airborne total magnetic intensity magnetometer receiver was employed to measure the time-domain EM responses of the conductive ore bodies. +.. - The Lalor deposit is a volcanogenic massive sulphide that is characterised as a stack of conductive ore lenses buried more than 600 m deep. +.. - Helicopter sub-audio magnetics (HeliSAM) survey using a ground large transmitter loop and an airborne total magnetic intensity magnetometer receiver was employed to measure the time-domain EM responses of the conductive ore bodies. .. - The Lalor ore lenses, as well as another small sulphide-bearing argillite, are imaged by 3D inversion. .. - Advanced inversion techniques, including warm-start and mesh refinement, were required to obtain high-quality 3D conductivity models. The Lalor deposit is a massive sulphide that is characterized as a stack of conductive ore lenses buried more than 600 m deep. As of 2014, the deposit has a reserve of 15.2 Mt and an inferred resource of 10.1 Mt. Compared to typical Canadian gold deposits, the Lalor lake deposit has a grade 130% above the average. -In order to characterize the Lalor lake deposit, a helicopter sub-audio magnetic (HeliSAM) survey using a ground large transmitter loop and an airborne total magnetic intensity magnetometer receiver was employed to measure the time-domain EM responses of the conductive ore bodies. Using inversion, the Lalor ore lenses as well as small sulphide-bearing argillite units were successfully imaged in 3D. The successful inversion of the geophysical data was made possible through the use of warm-start and mesh refinement algorithms. +In order to characterize the Lalor lake deposit, a helicopter sub-audio magnetic (HeliSAM) survey using a ground large transmitter loop and an airborne total magnetic intensity magnetometer receiver was employed to measure the time-domain EM responses of the conductive ore bodies. Using inversion, the Lalor ore lenses as well as small sulphide-bearing argillite units were successfully imaged in 3D. The successful inversion of the geophysical data was made possible through the use of warm-start and mesh refinement algorithms. **Contents** diff --git a/content/case_histories/noranda/index.rst b/content/case_histories/noranda/index.rst index 6040d53d..d8176083 100644 --- a/content/case_histories/noranda/index.rst +++ b/content/case_histories/noranda/index.rst @@ -18,11 +18,11 @@ The case history uses :ref:`ZTEM ` data to characterize large-scale **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Elliot Holtham and Douglas W. Oldenburg (2012). ”Large-scale inversion of ZTEM data.” GEOPHYSICS, 77(4), WB37-WB45. `https://doi.org/10.1190/geo2011-0367.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. **Abstract** @@ -50,5 +50,5 @@ Abstract required. :cite:`holthamoldenburg2012` : Large-scale inversion of ZTEM data - + diff --git a/content/case_histories/norsminde/index.rst b/content/case_histories/norsminde/index.rst index 2f624c64..88614ef0 100644 --- a/content/case_histories/norsminde/index.rst +++ b/content/case_histories/norsminde/index.rst @@ -15,11 +15,11 @@ Norsminde **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Cyril Schamper, Flemming Jørgensen, Esben Auken, and Flemming Effersø (2014). ”Assessment of near-surface mapping capabilities by airborne transient electromagnetic data — An extensive comparison to conventional borehole data.” GEOPHYSICS, 79(4), B187-B199. `https://doi.org/10.1190/geo2013-0256.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. **Abstract** diff --git a/content/case_histories/red_sea/index.rst b/content/case_histories/red_sea/index.rst index 0b5e42a8..4d585ea1 100644 --- a/content/case_histories/red_sea/index.rst +++ b/content/case_histories/red_sea/index.rst @@ -15,14 +15,14 @@ Red Sea **Special Thanks** -Thanks to Daniele Colombo of Saudi Aramco and thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to Daniele Colombo of Saudi Aramco and thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Daniele Colombo, Gary McNeice, Ernesto Sandoval Curiel, and Adam Fox (2013). ”Full tensor CSEM and MT for subsalt structural imaging in the Red Sea: Implications for seismic and electromagnetic integration.” The Leading Edge, 32(4), 436-449. `https://doi.org/10.1190/tle32040436.1 `__ - Daniele Colombo, Gary McNeice, Nickolas Raterman, Mike Zinger, Diego Rovetta, and Ernesto Sandoval Curiel (2014). ”Exploration beyond seismic: The role of electromagnetics and gravity gradiometry in deep water subsalt plays of the Red Sea.” Interpretation, 2(3), SH33-SH53. `https://doi.org/10.1190/INT-2013-0149.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material, and thanks to Daniele Colombo of Saudi Aramco. This case history was adapted from the papers `"Full tensor CSEM and MT for subsalt structural imaging in the Red +.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material, and thanks to Daniele Colombo of Saudi Aramco. This case history was adapted from the papers `"Full tensor CSEM and MT for subsalt structural imaging in the Red .. Sea: Implications for seismic and electromagnetic integration" `__ by :cite:`Colombo2013` and `"Exploration beyond seismic: The role of electromagnetics and gravity gradiometry in deep water subsalt plays of the Red Sea" `__ by :cite:`Colombo2014`. **Abstract** diff --git a/content/case_histories/sagd/index.rst b/content/case_histories/sagd/index.rst index 8975a6c2..4ea89b5c 100644 --- a/content/case_histories/sagd/index.rst +++ b/content/case_histories/sagd/index.rst @@ -15,12 +15,12 @@ SAGD **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Sarah G. R. Devriese and Douglas W. Oldenburg (2016). ”Feasibility of electromagnetic methods to detect and image steam-assisted gravity drainage steam chambers.” GEOPHYSICS, 81(4), E227-E241. `https://doi.org/10.1190/geo2015-0451.1 `__ - Sarah G. R. Devriese* and Douglas W. Oldenburg (2015) Time-lapse three-dimensional electromagnetic inversion of growth-impeded SAGD steam chambers. SEG Technical Program Expanded Abstracts 2015: pp. 2842-2847. `https://doi.org/10.1190/segam2015-5909921.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. **Abstract** @@ -49,4 +49,4 @@ Steam-assisted gravity drainage (SAGD) is a method for extracting heavy oil from :cite:`DevrieseOldenburg2016` : Feasibility of electromagnetic methods to detect and image steam-assisted gravity drainage steam chambers :cite:`DevrieseOldenburg2015b` : Time-lapse three-dimensional electromagnetic inversion of growth-impeded SAGD steam chambers - + diff --git a/content/case_histories/saurashtra/index.rst b/content/case_histories/saurashtra/index.rst index 1d22f535..190ea1d8 100644 --- a/content/case_histories/saurashtra/index.rst +++ b/content/case_histories/saurashtra/index.rst @@ -15,13 +15,13 @@ Saurashtra **Special Thanks** -Thanks to `KMS Technologies `__ and thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to `KMS Technologies `__ and thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - K. M. Strack and P. B. Pandey (2007). ”Exploration with controlled-source electromagnetics under basalt cover in India.” The Leading Edge, 26(3), 360-363. `https://doi.org/10.1190/1.2715056 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ and `KMS Technologies `__ for permission to reproduce figures and adapt text from the source material. This case history was adapted from the Leading Edge article `"Exploration with controlled–source electromagnetics under basalt cover in India" `__ by :cite:`strackpandey2007`. +.. Thanks to the `Society of Exploration Geophysicists `__ and `KMS Technologies `__ for permission to reproduce figures and adapt text from the source material. This case history was adapted from the Leading Edge article `"Exploration with controlled–source electromagnetics under basalt cover in India" `__ by :cite:`strackpandey2007`. **Abstract** @@ -31,9 +31,9 @@ The material presented here has been modified from the SEG-published version and :name: fig_thumbnail_saurashtra_index Recently, there has been increased interest, mostly offshore and to some extent onshore, in the controlled-source electromagnetic (CSEM) method because of its ability to map thin resistive layers sometimes associated with hydrocarbons. - + CSEM can complement other geophysical techniques in difficult areas, in particular areas with basalt cover and high seismic velocities. One CSEM method, long-offset transient electromagnetics (LOTEM), has intriguing possibilities because its acquisition/processing can be carried out in a manner similar to seismic surveys. In addition, the number of measurements per day is relatively high and the subsurface resistivity structures are reliable. Unlike marine CSEM, where we often look for a resistive reservoir in a conductive background, land EM methods are often looking for conductive sediments to infer structural or stratigraphic information. - + This case history describes how LOTEM was used for sub-basalt imaging in India in the late 1980s. A well drilled in the late 1990s confirmed the LOTEM interpretation which was based on various 1D inversion methods and 3D modeling. diff --git a/content/case_histories/wadi_sahba/index.rst b/content/case_histories/wadi_sahba/index.rst index d7d59486..ddf41143 100644 --- a/content/case_histories/wadi_sahba/index.rst +++ b/content/case_histories/wadi_sahba/index.rst @@ -15,13 +15,13 @@ Wadi Sabha **Special Thanks** -Thanks to Daniele Colombo of Saudi Aramco and thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to Daniele Colombo of Saudi Aramco and thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Daniele Colombo, Gary McNeice, Diego Rovetta, Ernesto Sandoval-Curiel, Ersan Turkoglu and Armando Sena (2016). ”High-resolution velocity modeling by seismic-airborne TEM joint inversion: A new perspective for near-surface characterization.” The Leading Edge, 35(11), 977–985. `https://doi.org/10.1190/tle35110977.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material, and thanks to Daniele Colombo of Saudi Aramco. This case history was adapted from the paper `"High-resolution velocity modeling by seismic-airborne TEM joint inversion: A new perspective for near-surface characterization" `__ by :cite:`colombo2016`. +.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material, and thanks to Daniele Colombo of Saudi Aramco. This case history was adapted from the paper `"High-resolution velocity modeling by seismic-airborne TEM joint inversion: A new perspective for near-surface characterization" `__ by :cite:`colombo2016`. **Abstract** diff --git a/content/case_histories/westplains/index.rst b/content/case_histories/westplains/index.rst index f64524a8..68b5570f 100644 --- a/content/case_histories/westplains/index.rst +++ b/content/case_histories/westplains/index.rst @@ -14,13 +14,13 @@ West Plains **Special Thanks** -Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: +Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from: - Michael S. McMillan, Christoph Schwarzbach, Eldad Haber, and Douglas W. Oldenburg (2015). ”3D parametric hybrid inversion of time-domain airborne electromagnetic data.” GEOPHYSICS, 80(6), K25-K36. `https://doi.org/10.1190/geo2015-0141.1 `__ -The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. +The material presented here has been modified from the SEG-published version and is subject to the `SEG terms of use and conditions `__. This case history was presented as a part of the `SEG 2017 Distinguished Instructor Short Course `__. -.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material. The material found here has been adapted primarily from the paper `"3D parametric hybrid inversion of time-domain airborne electromagnetic data" `__ (:cite:`McMillan2014`). +.. Thanks to the `Society of Exploration Geophysicists `__ for permission to reproduce figures and adapt text from the source material. The material found here has been adapted primarily from the paper `"3D parametric hybrid inversion of time-domain airborne electromagnetic data" `__ (:cite:`McMillan2014`). **Abstract** @@ -31,7 +31,7 @@ The material presented here has been modified from the SEG-published version and Description. -West Plains is an active orogenic gold exploration project, located in the South-West portion of the Archean Committee Bay greenstone belt, Nunavut Canada, owned by Auryn Resources Inc. In 2003 and 2005, two overlapping airborne electromagnetic (AEM) surveys were acquired with a time-domain VTEM and a frequency-domain RESOLVE system. The economic gold mineralization is hosted in conductive komatiite units within a resistive background, a scenario well suited for AEM data. The surveys were beneficial for garnering a better understanding of the 3D geometries of the target conductors and highlighted a scenario where a parametric inversion could provide additional insights. Overall the inferences gained from the AEM data helped provide new interpretations of the target region and will be helpful to guide future drill programs in the area. +West Plains is an active orogenic gold exploration project, located in the South-West portion of the Archean Committee Bay greenstone belt, Nunavut Canada, owned by Auryn Resources Inc. In 2003 and 2005, two overlapping airborne electromagnetic (AEM) surveys were acquired with a time-domain VTEM and a frequency-domain RESOLVE system. The economic gold mineralization is hosted in conductive komatiite units within a resistive background, a scenario well suited for AEM data. The surveys were beneficial for garnering a better understanding of the 3D geometries of the target conductors and highlighted a scenario where a parametric inversion could provide additional insights. Overall the inferences gained from the AEM data helped provide new interpretations of the target region and will be helpful to guide future drill programs in the area. **Contents** diff --git a/contributors.json b/contributors.json index 322771de..c1f2422b 100644 --- a/contributors.json +++ b/contributors.json @@ -141,32 +141,31 @@ "lmacgregor":{ "name":"Lucy Macgregor", "affiliation":"Rock Solid Images", - "email":"lucy.macgregor@rocksolidimages.com", - "url":"http://rocksolidimages.com", + "url":"https://rocksolidimage.com", "avatar":"https://github.com/geoscixyz/em/raw/master/images_contributors/placeholder.png" }, "palvarez":{ "name":"Pedro Alvarez", "affiliation":"Rock Solid Images", - "url":"http://rocksolidimages.com", + "url":"https://rocksolidimage.com", "avatar":"https://github.com/geoscixyz/em/raw/master/images_contributors/placeholder.png" }, "aalvarez":{ "name":"Amanda Alvarez", "affiliation":"Rock Solid Images", - "url":"http://rocksolidimages.com", + "url":"https://rocksolidimage.com", "avatar":"https://github.com/geoscixyz/em/raw/master/images_contributors/placeholder.png" }, "fbolivar":{ "name":"Fransisco Bolivar", "affiliation":"Rock Solid Images", - "url":"http://rocksolidimages.com", + "url":"https://rocksolidimage.com", "avatar":"https://github.com/geoscixyz/em/raw/master/images_contributors/placeholder.png" }, "rkeirstead":{ "name":"Rob Keirstead", "affiliation":"Rock Solid Images", - "url":"http://rocksolidimages.com", + "url":"https://rocksolidimage.com", "avatar":"https://github.com/geoscixyz/em/raw/master/images_contributors/placeholder.png" }, "tmartin":{ diff --git a/index.rst b/index.rst index 827fbebd..f0f57159 100644 --- a/index.rst +++ b/index.rst @@ -87,11 +87,11 @@ EM GeoSci and the SEG :align: right :alt: SEG logo :width: 35% - :target: https://seg.org/ + :target: https://seg.org EM GeoSci served as the main "textbook" resource for the `SEG 2017 Distinguished Instructor Short Course -`_ +`_ on “Geophysical Electromagnetics: Fundamentals and Applications”. We are grateful that the SEG supported us in our open-source experiment and allowed us to substitute EM GeoSci for the traditional hardcopy book that accompanies From ba5d8ac1c4862a1e06fb347d2473b14618f43da4 Mon Sep 17 00:00:00 2001 From: Santiago Soler Date: Fri, 29 Nov 2024 14:52:06 -0800 Subject: [PATCH 3/3] Revert "add small extension to get the edit on github button working" This reverts commit e33338ff2b22bc48be7b97cf17ca671f3ae08777. --- _ext/edit_on_github.py | 42 ------------------------------------------ conf.py | 22 ++++++++-------------- 2 files changed, 8 insertions(+), 56 deletions(-) delete mode 100644 _ext/edit_on_github.py diff --git a/_ext/edit_on_github.py b/_ext/edit_on_github.py deleted file mode 100644 index 6c8aca1d..00000000 --- a/_ext/edit_on_github.py +++ /dev/null @@ -1,42 +0,0 @@ -""" -Sphinx extension to add ReadTheDocs-style "Edit on GitHub" links to the -sidebar. - -Loosely based on https://github.com/astropy/astropy/pull/347 -""" - -import os -import warnings - - -__licence__ = 'BSD (3 clause)' - - -def get_github_url(app, view, path): - return 'https://github.com/{project}/{view}/{branch}/{path}'.format( - project=app.config.edit_on_github_project, - view=view, - branch=app.config.edit_on_github_branch, - path=path) - - -def html_page_context(app, pagename, templatename, context, doctree): - if templatename != 'page.html': - return - - if not app.config.edit_on_github_project: - warnings.warn("edit_on_github_project not specified") - return - - path = os.path.relpath(doctree.get('source'), app.builder.srcdir) - show_url = get_github_url(app, 'blob', path) - edit_url = get_github_url(app, 'edit', path) - - # context['show_on_github_url'] = show_url - context['edit_on_github_url'] = edit_url - - -def setup(app): - app.add_config_value('edit_on_github_project', '', True) - app.add_config_value('edit_on_github_branch', 'master', True) - app.connect('html-page-context', html_page_context) diff --git a/conf.py b/conf.py index cf229861..3335f0eb 100644 --- a/conf.py +++ b/conf.py @@ -41,7 +41,6 @@ 'sphinxcontrib.bibtex', 'sphinx_rtd_theme', 'matplotlib.sphinxext.plot_directive', - 'edit_on_github', 'purpose', 'question', 'geosciapp', @@ -84,7 +83,7 @@ # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. -language = "en" +language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: @@ -159,11 +158,6 @@ # number figures numfig = True -# -- Edit on Github Extension --------------------------------------------- - -edit_on_github_project = 'geoscixyz/em' -edit_on_github_branch = 'main' - # -- Options for HTML output ---------------------------------------------- @@ -172,13 +166,13 @@ import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' -# html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] -# html_context = { -# 'display_github': True, -# 'github_user': 'geoscixyz', -# 'github_repo': 'em', -# 'github_version': 'main' -# } +html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] +html_context = { + 'display_github': True, + 'github_user': 'geoscixyz', + 'github_repo': 'em', + 'github_version': 'main' +} # The name for this set of Sphinx documents. If None, it defaults to # " v documentation". html_title = 'Electromagnetic Geophysics'