From b6bb176baa813ce7da1ba54e7b4b70f1c88bb025 Mon Sep 17 00:00:00 2001
From: "George G. Vega Yon" <g.vegayon@gmail.com>
Date: Thu, 21 Nov 2024 12:14:38 -0700
Subject: [PATCH] Initial commit in branch

---
 .Rbuildignore                                 |   7 +---
 .gitignore                                    |   9 -----
 DESCRIPTION                                   |  31 ++++++------------
 NAMESPACE                                     |   5 ---
 egpkg-fall2024.Rproj                          |  22 +++++++++++++
 misc/.Rbuildignore                            |   7 ++++
 {.github => misc/.github}/.gitignore          |   0
 .../.github}/workflows/R-CMD-check.yaml       |   0
 misc/.gitignore                               |  10 ++++++
 misc/DESCRIPTION                              |  23 +++++++++++++
 misc/NAMESPACE                                |   7 ++++
 {R => misc/R}/RcppExports.R                   |   0
 {R => misc/R}/egpkg-package.R                 |   0
 {R => misc/R}/myplot.R                        |   0
 README.Rmd => misc/README.Rmd                 |   0
 README.md => misc/README.md                   |   0
 misc/Rplots.pdf                               | Bin 0 -> 10555 bytes
 egpkg.Rproj => misc/egpkg.Rproj               |   0
 {inst => misc/inst}/R_logo.svg.png            | Bin
 .../man}/figures/README-pressure-1.png        | Bin
 {man => misc/man}/myplot.Rd                   |   0
 {man => misc/man}/rcpp_hello_world.Rd         |   0
 {src => misc/src}/.gitignore                  |   0
 {src => misc/src}/RcppExports.cpp             |   0
 {src => misc/src}/rcpp_hello_world.cpp        |   0
 {tests => misc/tests}/testthat.R              |   0
 {tests => misc/tests}/testthat/Rplots.pdf     | Bin
 {tests => misc/tests}/testthat/test-myplot.R  |   0
 {vignettes => misc/vignettes}/.gitignore      |   0
 .../vignettes}/not-cool-package.Rmd           |   0
 30 files changed, 80 insertions(+), 41 deletions(-)
 create mode 100644 egpkg-fall2024.Rproj
 create mode 100644 misc/.Rbuildignore
 rename {.github => misc/.github}/.gitignore (100%)
 rename {.github => misc/.github}/workflows/R-CMD-check.yaml (100%)
 create mode 100644 misc/.gitignore
 create mode 100644 misc/DESCRIPTION
 create mode 100644 misc/NAMESPACE
 rename {R => misc/R}/RcppExports.R (100%)
 rename {R => misc/R}/egpkg-package.R (100%)
 rename {R => misc/R}/myplot.R (100%)
 rename README.Rmd => misc/README.Rmd (100%)
 rename README.md => misc/README.md (100%)
 create mode 100644 misc/Rplots.pdf
 rename egpkg.Rproj => misc/egpkg.Rproj (100%)
 rename {inst => misc/inst}/R_logo.svg.png (100%)
 rename {man => misc/man}/figures/README-pressure-1.png (100%)
 rename {man => misc/man}/myplot.Rd (100%)
 rename {man => misc/man}/rcpp_hello_world.Rd (100%)
 rename {src => misc/src}/.gitignore (100%)
 rename {src => misc/src}/RcppExports.cpp (100%)
 rename {src => misc/src}/rcpp_hello_world.cpp (100%)
 rename {tests => misc/tests}/testthat.R (100%)
 rename {tests => misc/tests}/testthat/Rplots.pdf (100%)
 rename {tests => misc/tests}/testthat/test-myplot.R (100%)
 rename {vignettes => misc/vignettes}/.gitignore (100%)
 rename {vignettes => misc/vignettes}/not-cool-package.Rmd (100%)

diff --git a/.Rbuildignore b/.Rbuildignore
index 5af7a0d..0063cd2 100644
--- a/.Rbuildignore
+++ b/.Rbuildignore
@@ -1,7 +1,2 @@
-^.*\.Rproj$
+^egpkg-fall2024\.Rproj$
 ^\.Rproj\.user$
-^\.github$
-^README\.Rmd$
-^Rplots\.pdf$
-^doc$
-^Meta$
diff --git a/.gitignore b/.gitignore
index 3b4e2e3..cd67eac 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,10 +1 @@
 .Rproj.user
-.Rhistory
-.RData
-.Ruserdata
-src/*.o
-src/*.so
-src/*.dll
-inst/doc
-/doc/
-/Meta/
diff --git a/DESCRIPTION b/DESCRIPTION
index d00308e..7d174ef 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,23 +1,12 @@
-Package: egpkg2024
-Type: Package
-Title: What the Package Does in One 'Title Case' Line
-Version: 1.0
-Date: 2023-02-23
-Author: Your Name
-Maintainer: Your Name <your@email.com>
-Description: One paragraph description of what the package does as
-       one or more full sentences.
-License: GPL (>= 2)
-Imports: 
-    Rcpp,
-    graphics
-LinkingTo: Rcpp
+Package: egpkg-fall2024
+Title: What the Package Does (One Line, Title Case)
+Version: 0.0.0.9000
+Authors@R: 
+    person("First", "Last", , "first.last@example.com", role = c("aut", "cre"),
+           comment = c(ORCID = "YOUR-ORCID-ID"))
+Description: What the package does (one paragraph).
+License: `use_mit_license()`, `use_gpl3_license()` or friends to pick a
+    license
+Encoding: UTF-8
 Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.3.2
-Encoding: UTF-8
-Suggests: 
-    knitr,
-    rmarkdown,
-    testthat (>= 3.0.0)
-Config/testthat/edition: 3
-VignetteBuilder: knitr
diff --git a/NAMESPACE b/NAMESPACE
index 8395bc5..6ae9268 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -1,7 +1,2 @@
 # Generated by roxygen2: do not edit by hand
 
-export(myplot)
-export(rcpp_hello_world)
-import(graphics)
-importFrom(Rcpp,evalCpp)
-useDynLib(egpkg2024, .registration = TRUE)
diff --git a/egpkg-fall2024.Rproj b/egpkg-fall2024.Rproj
new file mode 100644
index 0000000..69fafd4
--- /dev/null
+++ b/egpkg-fall2024.Rproj
@@ -0,0 +1,22 @@
+Version: 1.0
+
+RestoreWorkspace: No
+SaveWorkspace: No
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: Sweave
+LaTeX: pdfLaTeX
+
+AutoAppendNewline: Yes
+StripTrailingWhitespace: Yes
+LineEndingConversion: Posix
+
+BuildType: Package
+PackageUseDevtools: Yes
+PackageInstallArgs: --no-multiarch --with-keep.source
+PackageRoxygenize: rd,collate,namespace
diff --git a/misc/.Rbuildignore b/misc/.Rbuildignore
new file mode 100644
index 0000000..5af7a0d
--- /dev/null
+++ b/misc/.Rbuildignore
@@ -0,0 +1,7 @@
+^.*\.Rproj$
+^\.Rproj\.user$
+^\.github$
+^README\.Rmd$
+^Rplots\.pdf$
+^doc$
+^Meta$
diff --git a/.github/.gitignore b/misc/.github/.gitignore
similarity index 100%
rename from .github/.gitignore
rename to misc/.github/.gitignore
diff --git a/.github/workflows/R-CMD-check.yaml b/misc/.github/workflows/R-CMD-check.yaml
similarity index 100%
rename from .github/workflows/R-CMD-check.yaml
rename to misc/.github/workflows/R-CMD-check.yaml
diff --git a/misc/.gitignore b/misc/.gitignore
new file mode 100644
index 0000000..3b4e2e3
--- /dev/null
+++ b/misc/.gitignore
@@ -0,0 +1,10 @@
+.Rproj.user
+.Rhistory
+.RData
+.Ruserdata
+src/*.o
+src/*.so
+src/*.dll
+inst/doc
+/doc/
+/Meta/
diff --git a/misc/DESCRIPTION b/misc/DESCRIPTION
new file mode 100644
index 0000000..d00308e
--- /dev/null
+++ b/misc/DESCRIPTION
@@ -0,0 +1,23 @@
+Package: egpkg2024
+Type: Package
+Title: What the Package Does in One 'Title Case' Line
+Version: 1.0
+Date: 2023-02-23
+Author: Your Name
+Maintainer: Your Name <your@email.com>
+Description: One paragraph description of what the package does as
+       one or more full sentences.
+License: GPL (>= 2)
+Imports: 
+    Rcpp,
+    graphics
+LinkingTo: Rcpp
+Roxygen: list(markdown = TRUE)
+RoxygenNote: 7.3.2
+Encoding: UTF-8
+Suggests: 
+    knitr,
+    rmarkdown,
+    testthat (>= 3.0.0)
+Config/testthat/edition: 3
+VignetteBuilder: knitr
diff --git a/misc/NAMESPACE b/misc/NAMESPACE
new file mode 100644
index 0000000..8395bc5
--- /dev/null
+++ b/misc/NAMESPACE
@@ -0,0 +1,7 @@
+# Generated by roxygen2: do not edit by hand
+
+export(myplot)
+export(rcpp_hello_world)
+import(graphics)
+importFrom(Rcpp,evalCpp)
+useDynLib(egpkg2024, .registration = TRUE)
diff --git a/R/RcppExports.R b/misc/R/RcppExports.R
similarity index 100%
rename from R/RcppExports.R
rename to misc/R/RcppExports.R
diff --git a/R/egpkg-package.R b/misc/R/egpkg-package.R
similarity index 100%
rename from R/egpkg-package.R
rename to misc/R/egpkg-package.R
diff --git a/R/myplot.R b/misc/R/myplot.R
similarity index 100%
rename from R/myplot.R
rename to misc/R/myplot.R
diff --git a/README.Rmd b/misc/README.Rmd
similarity index 100%
rename from README.Rmd
rename to misc/README.Rmd
diff --git a/README.md b/misc/README.md
similarity index 100%
rename from README.md
rename to misc/README.md
diff --git a/misc/Rplots.pdf b/misc/Rplots.pdf
new file mode 100644
index 0000000000000000000000000000000000000000..7adae891a4c0c9e4915059d461f16cd470c34aa6
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