Use latest containers

Updates to use the latest object detection and segmentation containers that now include models downloaded from HuggingFace.

Version 1.0.0

Release created to populate Zenodo.

Simplifies workflow and other fixes

What's Changed

• updating section 1 of readme by @megbalk in #30
• Improve CSV parsing by @johnbradley in #32
• Add fixes from Minnow Traits by @johnbradley in #37
• Transforms metadata and streamlines the workflow by @johnbradley in #41
• Simplify Snakefile by @johnbradley in #43

New Contributors

• @megbalk made their first contribution in #30

Full Changelog: 0.0.16...1.0.0

more fix in Crop_image_main.py

Problem with library import which was not updated

Crop_image_main Truncated image fixed

in Crop_image_main.py accept truncated image like INHS_FISH_47071.jpg

new 0.0.14 release updated Crop_image_main.py

Fix truncated image error

more fixing... typo

0.0.13

Update Morphology_main.py

fix morphology_main.py for scale output

Change the order of input in Morphology_main.py to fix problem in Snakemake

fix keyerror has_ruler

• fix keyerror has_ruler
• chmod of merge_files_main.py

fix usage and add Merge_files_main.py

0.0.10

Update Dockerfile