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util_analysis.py
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util_analysis.py
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"""Utility classes and methods.
Author:
Chris Chute ([email protected])
"""
import logging
import os
import queue
import re
import shutil
import string
import torch
import torch.nn.functional as F
import torch.utils.data as data
import tqdm
import numpy as np
import ujson as json
from collections import Counter
class SQuAD(data.Dataset):
"""Stanford Question Answering Dataset (SQuAD).
Each item in the dataset is a tuple with the following entries (in order):
- context_idxs: Indices of the words in the context.
Shape (context_len,).
- context_char_idxs: Indices of the characters in the context.
Shape (context_len, max_word_len).
- question_idxs: Indices of the words in the question.
Shape (question_len,).
- question_char_idxs: Indices of the characters in the question.
Shape (question_len, max_word_len).
- y1: Index of word in the context where the answer begins.
-1 if no answer.
- y2: Index of word in the context where the answer ends.
-1 if no answer.
- id: ID of the example.
Args:
data_path (str): Path to .npz file containing pre-processed dataset.
use_v2 (bool): Whether to use SQuAD 2.0 questions. Otherwise only use SQuAD 1.1.
"""
def __init__(self, data_path, use_v2=True):
super(SQuAD, self).__init__()
dataset = np.load(data_path)
self.context_idxs = torch.from_numpy(dataset['context_idxs']).long()
self.context_char_idxs = torch.from_numpy(dataset['context_char_idxs']).long()
self.question_idxs = torch.from_numpy(dataset['ques_idxs']).long()
self.question_char_idxs = torch.from_numpy(dataset['ques_char_idxs']).long()
self.y1s = torch.from_numpy(dataset['y1s']).long()
self.y2s = torch.from_numpy(dataset['y2s']).long()
if use_v2:
# SQuAD 2.0: Use index 0 for no-answer token (token 1 = OOV)
batch_size, c_len, w_len = self.context_char_idxs.size()
ones = torch.ones((batch_size, 1), dtype=torch.int64)
self.context_idxs = torch.cat((ones, self.context_idxs), dim=1)
self.question_idxs = torch.cat((ones, self.question_idxs), dim=1)
ones = torch.ones((batch_size, 1, w_len), dtype=torch.int64)
self.context_char_idxs = torch.cat((ones, self.context_char_idxs), dim=1)
self.question_char_idxs = torch.cat((ones, self.question_char_idxs), dim=1)
self.y1s += 1
self.y2s += 1
# SQuAD 1.1: Ignore no-answer examples
self.ids = torch.from_numpy(dataset['ids']).long()
self.valid_idxs = [idx for idx in range(len(self.ids))
if use_v2 or self.y1s[idx].item() >= 0]
def __getitem__(self, idx):
idx = self.valid_idxs[idx]
example = (self.context_idxs[idx],
self.context_char_idxs[idx],
self.question_idxs[idx],
self.question_char_idxs[idx],
self.y1s[idx],
self.y2s[idx],
self.ids[idx])
return example
def __len__(self):
return len(self.valid_idxs)
def collate_fn(examples):
"""Create batch tensors from a list of individual examples returned
by `SQuAD.__getitem__`. Merge examples of different length by padding
all examples to the maximum length in the batch.
Args:
examples (list): List of tuples of the form (context_idxs, context_char_idxs,
question_idxs, question_char_idxs, y1s, y2s, ids).
Returns:
examples (tuple): Tuple of tensors (context_idxs, context_char_idxs, question_idxs,
question_char_idxs, y1s, y2s, ids). All of shape (batch_size, ...), where
the remaining dimensions are the maximum length of examples in the input.
Adapted from:
https://github.com/yunjey/seq2seq-dataloader
"""
def merge_0d(scalars, dtype=torch.int64):
return torch.tensor(scalars, dtype=dtype)
def merge_1d(arrays, dtype=torch.int64, pad_value=0):
lengths = [(a != pad_value).sum() for a in arrays]
padded = torch.zeros(len(arrays), max(lengths), dtype=dtype)
for i, seq in enumerate(arrays):
end = lengths[i]
padded[i, :end] = seq[:end]
return padded
def merge_2d(matrices, dtype=torch.int64, pad_value=0):
heights = [(m.sum(1) != pad_value).sum() for m in matrices]
widths = [(m.sum(0) != pad_value).sum() for m in matrices]
padded = torch.zeros(len(matrices), max(heights), max(widths), dtype=dtype)
for i, seq in enumerate(matrices):
height, width = heights[i], widths[i]
padded[i, :height, :width] = seq[:height, :width]
return padded
# Group by tensor type
context_idxs, context_char_idxs, \
question_idxs, question_char_idxs, \
y1s, y2s, ids = zip(*examples)
# Merge into batch tensors
context_idxs = merge_1d(context_idxs)
context_char_idxs = merge_2d(context_char_idxs)
question_idxs = merge_1d(question_idxs)
question_char_idxs = merge_2d(question_char_idxs)
y1s = merge_0d(y1s)
y2s = merge_0d(y2s)
ids = merge_0d(ids)
return (context_idxs, context_char_idxs,
question_idxs, question_char_idxs,
y1s, y2s, ids)
class AverageMeter:
"""Keep track of average values over time.
Adapted from:
> https://github.com/pytorch/examples/blob/master/imagenet/main.py
"""
def __init__(self):
self.avg = 0
self.sum = 0
self.count = 0
def reset(self):
"""Reset meter."""
self.__init__()
def update(self, val, num_samples=1):
"""Update meter with new value `val`, the average of `num` samples.
Args:
val (float): Average value to update the meter with.
num_samples (int): Number of samples that were averaged to
produce `val`.
"""
self.count += num_samples
self.sum += val * num_samples
self.avg = self.sum / self.count
class EMA:
"""Exponential moving average of model parameters.
Args:
model (torch.nn.Module): Model with parameters whose EMA will be kept.
decay (float): Decay rate for exponential moving average.
"""
def __init__(self, model, decay):
self.decay = decay
self.shadow = {}
self.original = {}
# Register model parameters
for name, param in model.named_parameters():
if param.requires_grad:
self.shadow[name] = param.data.clone()
def __call__(self, model, num_updates):
decay = min(self.decay, (1.0 + num_updates) / (10.0 + num_updates))
for name, param in model.named_parameters():
if param.requires_grad:
assert name in self.shadow
new_average = \
(1.0 - decay) * param.data + decay * self.shadow[name]
self.shadow[name] = new_average.clone()
def assign(self, model):
"""Assign exponential moving average of parameter values to the
respective parameters.
Args:
model (torch.nn.Module): Model to assign parameter values.
"""
for name, param in model.named_parameters():
if param.requires_grad:
assert name in self.shadow
self.original[name] = param.data.clone()
param.data = self.shadow[name]
def resume(self, model):
"""Restore original parameters to a model. That is, put back
the values that were in each parameter at the last call to `assign`.
Args:
model (torch.nn.Module): Model to assign parameter values.
"""
for name, param in model.named_parameters():
if param.requires_grad:
assert name in self.shadow
param.data = self.original[name]
class CheckpointSaver:
"""Class to save and load model checkpoints.
Save the best checkpoints as measured by a metric value passed into the
`save` method. Overwrite checkpoints with better checkpoints once
`max_checkpoints` have been saved.
Args:
save_dir (str): Directory to save checkpoints.
max_checkpoints (int): Maximum number of checkpoints to keep before
overwriting old ones.
metric_name (str): Name of metric used to determine best model.
maximize_metric (bool): If true, best checkpoint is that which maximizes
the metric value passed in via `save`. Otherwise, best checkpoint
minimizes the metric.
log (logging.Logger): Optional logger for printing information.
"""
def __init__(self, save_dir, max_checkpoints, metric_name,
maximize_metric=False, log=None):
super(CheckpointSaver, self).__init__()
self.save_dir = save_dir
self.max_checkpoints = max_checkpoints
self.metric_name = metric_name
self.maximize_metric = maximize_metric
self.best_val = None
self.ckpt_paths = queue.PriorityQueue()
self.log = log
self._print('Saver will {}imize {}...'
.format('max' if maximize_metric else 'min', metric_name))
def is_best(self, metric_val):
"""Check whether `metric_val` is the best seen so far.
Args:
metric_val (float): Metric value to compare to prior checkpoints.
"""
if metric_val is None:
# No metric reported
return False
if self.best_val is None:
# No checkpoint saved yet
return True
return ((self.maximize_metric and self.best_val < metric_val)
or (not self.maximize_metric and self.best_val > metric_val))
def _print(self, message):
"""Print a message if logging is enabled."""
if self.log is not None:
self.log.info(message)
def save(self, step, model, metric_val, device):
"""Save model parameters to disk.
Args:
step (int): Total number of examples seen during training so far.
model (torch.nn.DataParallel): Model to save.
metric_val (float): Determines whether checkpoint is best so far.
device (torch.device): Device where model resides.
"""
ckpt_dict = {
'model_name': model.__class__.__name__,
'model_state': model.cpu().state_dict(),
'step': step
}
model.to(device)
checkpoint_path = os.path.join(self.save_dir,
'step_{}.pth.tar'.format(step))
torch.save(ckpt_dict, checkpoint_path)
self._print('Saved checkpoint: {}'.format(checkpoint_path))
if self.is_best(metric_val):
# Save the best model
self.best_val = metric_val
best_path = os.path.join(self.save_dir, 'best.pth.tar')
shutil.copy(checkpoint_path, best_path)
self._print('New best checkpoint at step {}...'.format(step))
# Add checkpoint path to priority queue (lowest priority removed first)
if self.maximize_metric:
priority_order = metric_val
else:
priority_order = -metric_val
self.ckpt_paths.put((priority_order, checkpoint_path))
# Remove a checkpoint if more than max_checkpoints have been saved
if self.ckpt_paths.qsize() > self.max_checkpoints:
_, worst_ckpt = self.ckpt_paths.get()
try:
os.remove(worst_ckpt)
self._print('Removed checkpoint: {}'.format(worst_ckpt))
except OSError:
# Avoid crashing if checkpoint has been removed or protected
pass
def load_model(model, checkpoint_path, gpu_ids, return_step=True):
"""Load model parameters from disk.
Args:
model (torch.nn.DataParallel): Load parameters into this model.
checkpoint_path (str): Path to checkpoint to load.
gpu_ids (list): GPU IDs for DataParallel.
return_step (bool): Also return the step at which checkpoint was saved.
Returns:
model (torch.nn.DataParallel): Model loaded from checkpoint.
step (int): Step at which checkpoint was saved. Only if `return_step`.
"""
device = 'cuda:{}'.format(gpu_ids[0]) if gpu_ids else 'cpu'
ckpt_dict = torch.load(checkpoint_path, map_location=device)
# Build model, load parameters
model.load_state_dict(ckpt_dict['model_state'])
if return_step:
step = ckpt_dict['step']
return model, step
return model
def get_available_devices():
"""Get IDs of all available GPUs.
Returns:
device (torch.device): Main device (GPU 0 or CPU).
gpu_ids (list): List of IDs of all GPUs that are available.
"""
gpu_ids = []
if torch.cuda.is_available():
gpu_ids += [gpu_id for gpu_id in range(torch.cuda.device_count())]
device = torch.device('cuda:{}'.format(gpu_ids[0]))
torch.cuda.set_device(device)
else:
device = torch.device('cpu')
return device, gpu_ids
def masked_softmax(logits, mask, dim=-1, log_softmax=False):
"""Take the softmax of `logits` over given dimension, and set
entries to 0 wherever `mask` is 0.
Args:
logits (torch.Tensor): Inputs to the softmax function.
mask (torch.Tensor): Same shape as `logits`, with 0 indicating
positions that should be assigned 0 probability in the output.
dim (int): Dimension over which to take softmax.
log_softmax (bool): Take log-softmax rather than regular softmax.
E.g., some PyTorch functions such as `F.nll_loss` expect log-softmax.
Returns:
probs (torch.Tensor): Result of taking masked softmax over the logits.
"""
mask = mask.type(torch.float32)
masked_logits = mask * logits + (1 - mask) * -1e30
softmax_fn = F.log_softmax if log_softmax else F.softmax
probs = softmax_fn(masked_logits, dim)
return probs
def visualize(tbx, pred_dict, eval_path, step, split, num_visuals):
"""Visualize text examples to TensorBoard.
Args:
tbx (tensorboardX.SummaryWriter): Summary writer.
pred_dict (dict): dict of predictions of the form id -> pred.
eval_path (str): Path to eval JSON file.
step (int): Number of examples seen so far during training.
split (str): Name of data split being visualized.
num_visuals (int): Number of visuals to select at random from preds.
"""
if num_visuals <= 0:
return
if num_visuals > len(pred_dict):
num_visuals = len(pred_dict)
visual_ids = np.random.choice(list(pred_dict), size=num_visuals, replace=False)
with open(eval_path, 'r') as eval_file:
eval_dict = json.load(eval_file)
for i, id_ in enumerate(visual_ids):
pred = pred_dict[id_] or 'N/A'
example = eval_dict[str(id_)]
question = example['question']
context = example['context']
answers = example['answers']
gold = answers[0] if answers else 'N/A'
tbl_fmt = ('- **Question:** {}\n'
+ '- **Context:** {}\n'
+ '- **Answer:** {}\n'
+ '- **Prediction:** {}')
tbx.add_text(tag='{}/{}_of_{}'.format(split, i + 1, num_visuals),
text_string=tbl_fmt.format(question, context, gold, pred),
global_step=step)
def save_preds(preds, save_dir, file_name='predictions.csv'):
"""Save predictions `preds` to a CSV file named `file_name` in `save_dir`.
Args:
preds (list): List of predictions each of the form (id, start, end),
where id is an example ID, and start/end are indices in the context.
save_dir (str): Directory in which to save the predictions file.
file_name (str): File name for the CSV file.
Returns:
save_path (str): Path where CSV file was saved.
"""
# Validate format
if (not isinstance(preds, list)
or any(not isinstance(p, tuple) or len(p) != 3 for p in preds)):
raise ValueError('preds must be a list of tuples (id, start, end)')
# Make sure predictions are sorted by ID
preds = sorted(preds, key=lambda p: p[0])
# Save to a CSV file
save_path = os.path.join(save_dir, file_name)
np.savetxt(save_path, np.array(preds), delimiter=',', fmt='%d')
return save_path
def get_save_dir(base_dir, name, training, id_max=100):
"""Get a unique save directory by appending the smallest positive integer
`id < id_max` that is not already taken (i.e., no dir exists with that id).
Args:
base_dir (str): Base directory in which to make save directories.
name (str): Name to identify this training run. Need not be unique.
training (bool): Save dir. is for training (determines subdirectory).
id_max (int): Maximum ID number before raising an exception.
Returns:
save_dir (str): Path to a new directory with a unique name.
"""
for uid in range(1, id_max):
subdir = 'train' if training else 'test'
save_dir = os.path.join(base_dir, subdir, '{}-{:02d}'.format(name, uid))
if not os.path.exists(save_dir):
os.makedirs(save_dir)
return save_dir
raise RuntimeError('Too many save directories created with the same name. \
Delete old save directories or use another name.')
def get_logger(log_dir, name):
"""Get a `logging.Logger` instance that prints to the console
and an auxiliary file.
Args:
log_dir (str): Directory in which to create the log file.
name (str): Name to identify the logs.
Returns:
logger (logging.Logger): Logger instance for logging events.
"""
class StreamHandlerWithTQDM(logging.Handler):
"""Let `logging` print without breaking `tqdm` progress bars.
See Also:
> https://stackoverflow.com/questions/38543506
"""
def emit(self, record):
try:
msg = self.format(record)
tqdm.tqdm.write(msg)
self.flush()
except (KeyboardInterrupt, SystemExit):
raise
except:
self.handleError(record)
# Create logger
logger = logging.getLogger(name)
logger.setLevel(logging.DEBUG)
# Log everything (i.e., DEBUG level and above) to a file
log_path = os.path.join(log_dir, 'log.txt')
file_handler = logging.FileHandler(log_path)
file_handler.setLevel(logging.DEBUG)
# Log everything except DEBUG level (i.e., INFO level and above) to console
console_handler = StreamHandlerWithTQDM()
console_handler.setLevel(logging.INFO)
# Create format for the logs
file_formatter = logging.Formatter('[%(asctime)s] %(message)s',
datefmt='%m.%d.%y %H:%M:%S')
file_handler.setFormatter(file_formatter)
console_formatter = logging.Formatter('[%(asctime)s] %(message)s',
datefmt='%m.%d.%y %H:%M:%S')
console_handler.setFormatter(console_formatter)
# add the handlers to the logger
logger.addHandler(file_handler)
logger.addHandler(console_handler)
return logger
def torch_from_json(path, dtype=torch.float32):
"""Load a PyTorch Tensor from a JSON file.
Args:
path (str): Path to the JSON file to load.
dtype (torch.dtype): Data type of loaded array.
Returns:
tensor (torch.Tensor): Tensor loaded from JSON file.
"""
with open(path, 'r') as fh:
array = np.array(json.load(fh))
tensor = torch.from_numpy(array).type(dtype)
return tensor
def discretize(p_start, p_end, max_len=15, no_answer=False):
"""Discretize soft predictions to get start and end indices.
Choose the pair `(i, j)` of indices that maximizes `p1[i] * p2[j]`
subject to `i <= j` and `j - i + 1 <= max_len`.
Args:
p_start (torch.Tensor): Soft predictions for start index.
Shape (batch_size, context_len).
p_end (torch.Tensor): Soft predictions for end index.
Shape (batch_size, context_len).
max_len (int): Maximum length of the discretized prediction.
I.e., enforce that `preds[i, 1] - preds[i, 0] + 1 <= max_len`.
no_answer (bool): Treat 0-index as the no-answer prediction. Consider
a prediction no-answer if `preds[0, 0] * preds[0, 1]` is greater
than the probability assigned to the max-probability span.
Returns:
start_idxs (torch.Tensor): Hard predictions for start index.
Shape (batch_size,)
end_idxs (torch.Tensor): Hard predictions for end index.
Shape (batch_size,)
"""
if p_start.min() < 0 or p_start.max() > 1 \
or p_end.min() < 0 or p_end.max() > 1:
raise ValueError('Expected p_start and p_end to have values in [0, 1]')
# Compute pairwise probabilities
p_start = p_start.unsqueeze(dim=2)
p_end = p_end.unsqueeze(dim=1)
p_joint = torch.matmul(p_start, p_end) # (batch_size, c_len, c_len)
# Restrict to pairs (i, j) such that i <= j <= i + max_len - 1
c_len, device = p_start.size(1), p_start.device
is_legal_pair = torch.triu(torch.ones((c_len, c_len), device=device))
is_legal_pair -= torch.triu(torch.ones((c_len, c_len), device=device),
diagonal=max_len)
if no_answer:
# Index 0 is no-answer
p_no_answer = p_joint[:, 0, 0].clone()
is_legal_pair[0, :] = 0
is_legal_pair[:, 0] = 0
else:
p_no_answer = None
p_joint *= is_legal_pair
# Take pair (i, j) that maximizes p_joint
max_in_row, _ = torch.max(p_joint, dim=2)
max_in_col, _ = torch.max(p_joint, dim=1)
start_idxs = torch.argmax(max_in_row, dim=-1)
end_idxs = torch.argmax(max_in_col, dim=-1)
if no_answer:
# Predict no-answer whenever p_no_answer > max_prob
max_prob, _ = torch.max(max_in_col, dim=-1)
start_idxs[p_no_answer > max_prob] = 0
end_idxs[p_no_answer > max_prob] = 0
return start_idxs, end_idxs
def convert_tokens(eval_dict, qa_id, y_start_list, y_end_list, no_answer):
"""Convert predictions to tokens from the context.
Args:
eval_dict (dict): Dictionary with eval info for the dataset. This is
used to perform the mapping from IDs and indices to actual text.
qa_id (int): List of QA example IDs.
y_start_list (list): List of start predictions.
y_end_list (list): List of end predictions.
no_answer (bool): Questions can have no answer. E.g., SQuAD 2.0.
Returns:
pred_dict (dict): Dictionary index IDs -> predicted answer text.
sub_dict (dict): Dictionary UUIDs -> predicted answer text (submission).
"""
pred_dict = {}
sub_dict = {}
for qid, y_start, y_end in zip(qa_id, y_start_list, y_end_list):
context = eval_dict[str(qid)]["context"]
# print (eval_dict[str(qid)]["context"])
# print (eval_dict[str(qid)]["question"])
#...
# context_len = len(eval_dict[str(qid)]["context"])
# answer = eval_dict[str(qid)]["question"]
spans = eval_dict[str(qid)]["spans"]
uuid = eval_dict[str(qid)]["uuid"]
if no_answer and (y_start == 0 or y_end == 0):
pred_dict[str(qid)] = ''
sub_dict[uuid] = ''
else:
if no_answer:
y_start, y_end = y_start - 1, y_end - 1
start_idx = spans[y_start][0]
end_idx = spans[y_end][1]
pred_dict[str(qid)] = context[start_idx: end_idx]
sub_dict[uuid] = context[start_idx: end_idx]
return pred_dict, sub_dict,
def metric_max_over_ground_truths(metric_fn, prediction, ground_truths):
if not ground_truths:
return metric_fn(prediction, '')
scores_for_ground_truths = []
for ground_truth in ground_truths:
score = metric_fn(prediction, ground_truth)
scores_for_ground_truths.append(score)
return max(scores_for_ground_truths)
def eval_dicts(gold_dict, pred_dict, no_answer):
avna = f1 = em = total = 0
context_len_dict = np.zeros(400)
for key, value in pred_dict.items():
total += 1
context_len_dict[min((len(gold_dict[key]['context']) - 1), 399)] +=1
ground_truths = gold_dict[key]['answers']
prediction = value
em += metric_max_over_ground_truths(compute_em, prediction, ground_truths)
f1 += metric_max_over_ground_truths(compute_f1, prediction, ground_truths)
if no_answer:
avna += compute_avna(prediction, ground_truths)
eval_dict = {'EM': 100. * em / total,
'F1': 100. * f1 / total}
if no_answer:
eval_dict['AvNA'] = 100. * avna / total
# print (context_len_dict)
return eval_dict
def eval_class_dicts(gold_dict, pred_dict, no_answer):
avna = np.zeros(8)
f1 = np.zeros(8)
em = np.zeros(8)
total = np.zeros(8)
for key, value in pred_dict.items():
# total += 1
ground_truths = gold_dict[key]['answers']
prediction = value
question = gold_dict[key]['question']
question_len = len(gold_dict[key]['question'])
context_len = len(gold_dict[key]['context'])
cur_class = None
if "how" in question.lower():
cur_class = 0
elif "what" in question.lower():
cur_class = 1
elif "why" in question.lower():
cur_class = 2
elif "which" in question.lower():
cur_class = 3
elif "who" in question.lower():
cur_class = 4
elif "where" in question.lower():
cur_class = 5
elif "when" in question.lower():
cur_class = 6
else:
cur_class = 7#other
em[cur_class] += metric_max_over_ground_truths(compute_em, prediction, ground_truths)
f1[cur_class] += metric_max_over_ground_truths(compute_f1, prediction, ground_truths)
if no_answer:
avna[cur_class] += compute_avna(prediction, ground_truths)
total[cur_class] +=1
eval_dict = {'EM': 100. * em / total,
'F1': 100. * f1 / total}
if no_answer:
eval_dict['AvNA'] = 100. * avna / total
return eval_dict
def eval_len_dicts(gold_dict, pred_dict, no_answer):
avna = np.zeros(8)
f1 = np.zeros(8)
em = np.zeros(8)
total = np.zeros(8)
for key, value in pred_dict.items():
# total += 1
ground_truths = gold_dict[key]['answers']
prediction = value
question = gold_dict[key]['question']
question_len = len(gold_dict[key]['question'])
context_len = len(gold_dict[key]['context'])
cur_class = None
if "how" in question.lower():
cur_class = 0
elif "what" in question.lower():
cur_class = 1
elif "why" in question.lower():
cur_class = 2
elif "which" in question.lower():
cur_class = 3
elif "who" in question.lower():
cur_class = 4
elif "where" in question.lower():
cur_class = 5
elif "when" in question.lower():
cur_class = 6
else:
cur_class = 7#other
em[cur_class] += metric_max_over_ground_truths(compute_em, prediction, ground_truths)
f1[cur_class] += metric_max_over_ground_truths(compute_f1, prediction, ground_truths)
if no_answer:
avna[cur_class] += compute_avna(prediction, ground_truths)
total[cur_class] +=1
eval_dict = {'EM': 100. * em / total,
'F1': 100. * f1 / total}
if no_answer:
eval_dict['AvNA'] = 100. * avna / total
return eval_dict
def compute_avna(prediction, ground_truths):
"""Compute answer vs. no-answer accuracy."""
return float(bool(prediction) == bool(ground_truths))
# All methods below this line are from the official SQuAD 2.0 eval script
# https://worksheets.codalab.org/rest/bundles/0x6b567e1cf2e041ec80d7098f031c5c9e/contents/blob/
def normalize_answer(s):
"""Convert to lowercase and remove punctuation, articles and extra whitespace."""
def remove_articles(text):
regex = re.compile(r'\b(a|an|the)\b', re.UNICODE)
return re.sub(regex, ' ', text)
def white_space_fix(text):
return ' '.join(text.split())
def remove_punc(text):
exclude = set(string.punctuation)
return ''.join(ch for ch in text if ch not in exclude)
def lower(text):
return text.lower()
return white_space_fix(remove_articles(remove_punc(lower(s))))
def get_tokens(s):
if not s:
return []
return normalize_answer(s).split()
def compute_em(a_gold, a_pred):
return int(normalize_answer(a_gold) == normalize_answer(a_pred))
def compute_f1(a_gold, a_pred):
gold_toks = get_tokens(a_gold)
pred_toks = get_tokens(a_pred)
common = Counter(gold_toks) & Counter(pred_toks)
num_same = sum(common.values())
if len(gold_toks) == 0 or len(pred_toks) == 0:
# If either is no-answer, then F1 is 1 if they agree, 0 otherwise
return int(gold_toks == pred_toks)
if num_same == 0:
return 0
precision = 1.0 * num_same / len(pred_toks)
recall = 1.0 * num_same / len(gold_toks)
f1 = (2 * precision * recall) / (precision + recall)
return f1