v0.6.3-beta

Bug fix, see #36 for more details.

v0.6.2-beta

Fixing negative branch lengths when simulating from non-ultrametric species network.

Using scrm random number generator

v0.6.1-beta

update travis

hybrid-Lambda: v0.6-beta

1. checking boundary contortions for lambda coalescent parameters at 0 and 1
2. throw exceptions when the coalescent parameter is out of bound

hybrid-Lambda v0.5-beta

• Added fst calculation
• Included boost library

hybrid-Lambda:v0.4-beta

Reworked on the interface. Will check for illegal notations

hybrid-lambda v0.3-beta

Migrated from google-code.

Fixed a bug in hybrid-lambda-beta.tar.gz-0.2 version. When lambda coalescent was used, the parameters were computed wrong.

Compare to version hybrid-lambda-beta.tar.gz and hybrid-lambda-beta-0,1.tar.gz

1. Fixed bug for genealogy branch length (when simulating from a network).
2. Using boost functions for calculating the binomial coefficient. It can handle sample sizes up to 10^3 for Lambda coalescent. (NOTE: a bug was introduced in this step in the first attempt.)
3. Disabled log function by default. Use option '-log [FILE]' to enable.
4. Added new function to calculate the TMRCA for the gene trees.