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-publish_mode: editorial_workflow
-backend:
- name: github
- repo: hzi-braunschweig/serohub
- open_authoring: true
-media_folder: "static/img/uploads"
-public_folder: "/img/uploads"
-
-collections:
- - name: 'studies'
- label: 'Study'
- folder: 'content/studies'
- create: true
- fields:
- - label: "Study name"
- name: "title"
- widget: "string"
- required: true
- - label: "Project URL"
- name: "project_url"
- widget: "string"
- required: false
- - label: "Study Logo"
- name: "logo_url"
- widget: "image"
- required: false
- media_library:
- config:
- multiple: false
- - label: "Study abbreviation"
- name: "abbreviation"
- widget: "string"
- required: false
- - label: "Study info"
- name: study_info
- collapsed: true
- widget: "object"
- fields:
- - label: "Primary research question(s)"
- name: "research_question"
- widget: "markdown"
- minimal: true
- required: false
- - label: "Used Diagnostic test"
- name: "diagnostic_test"
- widget: "list"
- required: false
- fields:
- - {label: "Test kit product name", name: "product", widget: "string", required: false}
- - {label: "Test kit manufacturer", name: "company", widget: "string", required: false}
- - {label: "Manufacturer address", name: "address", widget: "string", hint: "city and country is sufficient", required: false}
- - {label: "Type of assay", name: "type", widget: "string", required: false}
- - label: "Tested antibody classes (kit specific)"
- name: "antibody_classes"
- widget: "select"
- multiple: true
- required: false
- options:
- - { label: "IgG", value: "IgG" }
- - { label: "IgM", value: "IgM" }
- - { label: "IgA", value: "IgA" }
- - { label: "other immune response", value: "other immune response" }
- - { label: "not specified", value: "not specified" }
- - label: "Tested antibody classes in the study"
- name: "tested_antibody_classes"
- widget: "select"
- multiple: true
- required: false
- options:
- - { label: "IgG", value: "IgG" }
- - { label: "IgM", value: "IgM" }
- - { label: "IgA", value: "IgA" }
- - { label: "other immune response", value: "other immune response" }
- - { label: "not specified", value: "not specified" }
- - label: "Primary outcomes"
- name: "primary_outcomes"
- widget: "markdown"
- minimal: true
- required: false
- - label: "Funding source(s)"
- name: "funding_sources"
- widget: "markdown"
- minimal: true
- required: false
- - label: "Recruitment"
- name: "recruitment"
- collapsed: true
- widget: "object"
- fields:
- - label: "Sampling Locations"
- name: "location"
- widget: "list"
- required: false
- fields:
- - {label: "Place name", name: "place_name", widget: "string", required: true}
- - {label: "Latitude", name: "latitude", widget: "number", valueType: "float", min: -90.0, max: 90.0, required: false}
- - {label: "Longitude", name: "longitude", widget: "number", valueType: "float", min: -180.0, max: 180.0, required: false}
- - label: "Country"
- name: "country"
- widget: "list"
- required: false
- - label: "Type of recruitment"
- name: "type"
- widget: "select"
- multiple: false
- required: false
- options:
- - { label: "randomised individual invited voluntary", value: "randomised individual invited voluntary"}
- - { label: "random walk", value: "random walk" }
- - { label: "exploratory population-based cohort study", value: "exploratory population-based cohort study" }
- - { label: "others", value: "others" }
- - { label: "not specified", value: "not specified" }
- - label: "Type of population"
- name: "group"
- widget: "select"
- multiple: false
- required: false
- options:
- - { label: "general population", value: "general population" }
- - { label: "medical personnel", value: "medical personnel" }
- - { label: "members of companies or organizations", value: "members of companies or organizations" }
- - { label: "persons with defined exposure", value: "persons with defined exposure" }
- - { label: "entire households", value: "entire households" }
- - { label: "convalescent", value: "convalescent" }
- - { label: "patients under treatment", value: "patients under treatment" }
- - { label: "children", value: "children" }
- - { label: "others", value: "others" }
- - { label: "not specified", value: "not specified" }
- - label: "Study values"
- name: study_numbers
- collapsed: true
- widget: "object"
- fields:
- - label: "Study population"
- name: "study_population"
- widget: "number"
- required: false
- - label: "Total population in this area"
- name: "population"
- widget: "number"
- required: false
- - label: "Study key dates"
- name: "study_dates"
- collapsed: true
- widget: "object"
- fields:
- - label: "Sampling start month"
- name: "sample_start"
- widget: "datetime"
- format: "YYYY-MM"
- default: ""
- hint: "Stores the year and month when sampling started"
- required: false
- - label: "Sampling end month"
- name: "sample_end"
- widget: "datetime"
- format: "YYYY-MM"
- default: ""
- hint: "Stores the year and month when sampling has ended / will end"
- required: false
- - label: "Study start"
- name: "study_start"
- widget: "datetime"
- format: "YYYY-MM"
- default: ""
- hint: "Stores the year and month when the study starts"
- required: false
- - label: "Month of first expected results"
- name: "study_first_results"
- widget: "datetime"
- format: "YYYY-MM"
- default: ""
- hint: "Stores the year and month when first results are expected"
- required: false
- - label: "Results"
- name: results
- collapsed: true
- widget: "object"
- fields:
- - {label: "Preprint DOI", name: "doi_preprint", widget: "string", required: false}
- - {label: "Journal DOI", name: "doi_journal", widget: "string", required: false}
- - {label: "Data DOI", name: "doi_data", widget: "string", required: false}
- - label: "Misc Sources"
- name: "misc"
- widget: "list"
- fields:
- - {label: "URL", name: "url", widget: "string", required: false}
- - {label: "Description", name: "desc", widget: "string", required: false}
- - {label: "Date", name: "date", widget: "date", format: "YYYY-MM-DD", required: false}
- - label: "Study Principal Investigator (PI)"
- name: study_pi
- collapsed: true
- widget: "object"
- fields:
- - label: "Name"
- name: "name"
- widget: "string"
- - label: "Institution"
- name: "institution"
- widget: "string"
- - label: "Contact email"
- name: "email"
- widget: "string"
- required: false
- - label: "Team Members"
- name: team
- widget: "list"
- fields:
- - {label: "Team role", name: "role", widget: "string", required: false}
- - {label: "Name", name: "name", widget: "string"}
- - {label: "Academic title", name: "title", widget: "string", required: false}
- - {label: "Institution", name: "institution", widget: "string", required: false}
- - {label: "Position at institution", name: "position", widget: "string", required: false}
- - {label: "Contact email", name: "email", widget: "string", required: false}
- - label: "Study overview"
- name: "body"
- widget: "markdown"
- - name: 'publications'
- label: 'Publication'
- folder: 'content/publication'
- create: true
- fields:
- - label: "Title"
- name: "title"
- widget: "string"
- required: true
- - label: "Authors"
- name: "authors"
- widget: "list"
- required: false
- - label: "Publication"
- name: "publication"
- widget: "string"
- required: true
- - label: "Publish date"
- name: "date"
- widget: "datetime"
- format: "YYYY-MM-DD"
- default: ""
- required: false
- - label: "Short abstract"
- name: "abstract_short"
- widget: "markdown"
- required: false
- - label: "Abstract"
- name: "abstract"
- widget: "markdown"
- required: false
- - label: "Main Image"
- name: "image"
- widget: "image"
- allow_multiple: false
- required: false
- - label: "Thumbnail Image"
- name: "image_preview"
- widget: "image"
- allow_multiple: false
- required: false
- - label: "Code URL"
- name: "url_code"
- widget: "string"
- required: false
- - label: "Dataset URL"
- name: "url_dataset"
- widget: "string"
- required: false
- - label: "PDF URL"
- name: "url_pdf"
- widget: "string"
- required: false
- - label: "Project URL"
- name: "url_project"
- widget: "string"
- required: false
- - label: "Slides URL"
- name: "url_slides"
- widget: "string"
- required: false
- - label: "Video URL"
- name: "url_video"
- widget: "string"
- required: false
- - label: "Additional information"
- name: "body"
- widget: "markdown"
- default: ""
- - name: 'posts'
- label: 'General content'
- folder: 'content/posts'
- create: true
- fields:
- - label: "Title"
- name: "title"
- widget: "string"
- required: true
- - label: "Author"
- name: "author"
- widget: "string"
- required: true
- - label: "Publish date"
- name: "date"
- widget: "datetime"
- format: "YYYY-MM-DD HH:MM:SS"
- required: true
- - label: "Image"
- name: "image"
- widget: "image"
- allow_multiple: false
- required: false
- - label: "Post"
- name: "body"
- widget: "markdown"
- default: ""
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-
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- Content Manager
-
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