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ChangeLog
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ChangeLog
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2010-10-08 Martin Maechler <[email protected]>
* R/pcalg.R (pdsep): biCC: speedup
2010-10-07 Markus Kalisch <[email protected]>
* R/pcalg.R (fci): Added option "labels" to give nodenames to PAG
(myfun): Undid MMs change in plot-fci, since the edge marks were
not plotted properly anymore
2010-09-28 Markus Kalisch <[email protected]>
* man/gmI.Rd: description & details added
* man/gmG.Rd: description & details added
* man/gmD.Rd: description & details added
* man/gmB.Rd: description & details added
2010-09-10 Martin Maechler <[email protected]>
* R/pcalg.R (lm.cov): solve(A, b), *NOT* solve(A) %*% b !!!!!!!!
(legal.psep): speed up
* R/pcalg.R (plot(<fciAlgo>): make 'main' working, as for plot(<pc>)
2010-09-09 Markus Kalisch <[email protected]>
* inst/doc/pcalgDoc.Snw (effect): Adapted text and code to fit to
the new data files
* man/skeleton.Rd: Adapted examples to new form of data files
* man/pc.Rd: Adapted examples to new form of data files
2010-08-11 Markus Kalisch <[email protected]>
* tests/test_fci.R: Tests for conservative FCI added
* tests/test_pc.R: Tests for conservative PC added
2010-08-09 Markus Kalisch <[email protected]>
* R/pcalg.R (upd): improved by diego
(ucp): improved by diego
(discr.path): improved by diego
(faith.check): new by diego
(checkTriple): new by markus and diego
(pc.cons.intern): new by diego
(find.upd): improved by diego
(triple2numb): new by diego
(pc): option 'conservative' included
(udag2pdagRelaxed): option 'unfVect' added for use in
conservative PC
(fci): options 'conservative', 'biCC' and 'cons.rules' added
(pdsep): options 'unfVect' and 'biCC' added
(udag2pag): option 'unfVect' added for use in
conservative PC
2010-04-14 Markus Kalisch <[email protected]>
* R/pcalg.R (randomDAG): Bug fix (Empty graph could not be
transformed into adj matrix with as(G,"matrix"). Although it worked
with wgtMatrix, it was still worth fixing.
2010-04-06 Markus Kalisch <[email protected]>
* R/pcalg.R (idaFast): Included rownames indicating the element of
y.pos.set, to which the line corresponds
2010-03-26 Markus Kalisch <[email protected]>
* man/skeleton.Rd (fixedEdges): removed x11() and added split window
* man/pc.Rd (fixedEdges): removed x11() and added split window
* R/pcalg.R (ida): No change in functionality; changed
implementation of argument y.notparent so that it is easier to
understand. Checked that old and new version give identical results
on 100 random graphs.
2010-03-23 Martin Maechler <[email protected]>
* DESCRIPTION (Version): 1.0-1
* R/pcalg.R (plot-methods, plotSG): need Rgraphviz::plot() now that Rgraphviz is
not imported *before* method definition.
* R/AllClasses.R: move class definitions here (at least).
* pcalg.R (plotSG): add 'main' argument; do *return* the subgraph,
clean up code.
* man/plotSG.Rd: document 'main', use markup (\code{..}) properly.
2010-03-22 Markus Kalisch <[email protected]>
* NAMESPACE: no longer import (from) Rgraphviz
* DESCRIPTION: ditto