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Peru_255_ML.tre
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Peru_255_ML.tre
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#NEXUS
begin taxa;
dimensions ntax=255;
taxlabels
Peru2901
Peru2907
Peru2940
Peru2941
Peru2964
Peru2968
Peru3022
Peru3059
Peru3282
Peru3294
Peru3308
Peru3328
Peru3343
Peru3392
Peru4003
Peru4013
Peru4082
Peru4098
Peru4109
Peru4479
Peru4484
Peru5197
Peru5198
Peru5200
Peru5201
Peru5202
Peru5203
Peru5204
Peru5206
Peru5207
Peru5208
Peru5209
Peru5210
Peru5275
Peru6017
Peru6044
Peru6054
Peru6064
Peru6069
Peru6090
Peru6091
Peru6092
Peru6121
Peru6127
Peru6130
Peru6135
Peru6136
Peru6138
Peru6145
Peru6150
Peru6229
Peru6240
Peru6247
Peru6283
Peru6374
Peru6381
Peru6382
Peru6393
Peru6402
Peru6419
Peru6422
Peru6436
Peru6438
Peru6442
Peru6461
Peru6462
Peru6474
Peru6486
Peru6507
Peru6510
Peru6512
Peru6517
Peru6522
Peru6527
Peru6528
Peru6529
Peru6550
Peru6559
Peru6562
Peru6573
Peru6579
Peru6580
Peru6589
Peru6592
Peru6603
Peru7036
Peru7037
Peru7046
Peru7058
Peru7063
Peru7068
Peru7081
Peru7095
Peru7104
Peru7107
Peru7114
Peru7117
Peru7124
Peru7132
Peru7151
Peru7164
Peru7171
Peru7174
Peru7177
Peru7184
Peru7189
Peru7199
Peru7205
Peru7208
Peru7218
Peru7225
Peru7230
Peru7264
Peru7268
Peru7269
Peru7294
Peru7303
Peru7307
Peru7308
Peru7315
Peru7330
Peru7332
Peru7335
Peru7336
Peru7341
Peru7347
Peru7350
Peru7357
Peru7360
Peru7364
Peru7379
Peru7396
Peru7406
Peru7414
Peru7416
Peru7435
Peru7437
Peru7455
Peru7460
Peru7463
Peru7486
Peru7497
Peru7498
Peru7505
Peru7507
Peru7522
Peru7532
Peru7555
Peru7578
Peru7606
Peru7628
Peru7651
Peru7656
Peru7665
Peru7673
Peru7678
Peru7695
Peru7710
Peru7714
Peru7717
Peru7721
Peru7735
Peru7739
Peru7746
Peru7749
Peru7755
Peru7756
Peru7781
Peru7801
Peru7822
Peru7826
Peru7841
Peru7842
Peru7860
Peru7867
Peru7874
Peru7877
Peru7885
Peru7891
Peru7895
Peru7909
Peru7911
Peru7928
Peru7929
Peru7934
Peru7944
Peru7951
Peru7953
Peru7984
Peru7995
Peru8002
Peru8017
Peru8018
Peru8033
Peru8041
Peru8047
Peru8055
Peru8062
Peru8066
Peru8084
Peru8096
Peru8098
Peru8102
Peru8114
Peru8124
Peru8127
Peru8129
Peru8143
Peru8144
Peru8146
Peru8152
Peru8164
Peru8165
Peru8169
Peru8171
Peru8174
Peru8186
Peru8189
Peru8196
Peru8204
Peru8224
Peru8235
Peru8246
Peru8247
Peru8255
Peru8258
Peru8264
Peru8515
Peru8538
Peru8569
Peru8609
Peru8624
Peru8628
Peru8629
Peru8632
Peru8638
Peru8676
Peru8681
Peru8685
Peru8705
Peru8711
Peru8720
Peru8728
Peru8737
Peru8743
Peru8778
Peru8797
Peru8859
Peru8887
Peru8900
Peru8927
Peru8959
Peru8968
Peru9031
Peru9059
;
end;
begin trees;
tree tree_1 = [&R] ((Peru7199:0.047198,Peru7208:0.047579)[&label=1.0]:0.022354,((((Peru3328:0.003109,Peru8968:0.001447)[&label=0.68]:2.93E-4,(Peru7416:0.001263,Peru7756:0.001123)[&label=0.68]:4.24E-4)[&label=1.0]:0.005609,Peru9031:0.007154)[&label=1.0]:0.057826,((Peru7665:0.039519,Peru8859:0.046564)[&label=0.99]:0.002932,((((Peru6136:0.0,Peru5200:2.77E-4)[&label=0.91]:6.01E-4,Peru4082:5.61E-4)[&label=0.95]:0.0,Peru7107:5.58E-4)[&label=1.0]:0.044526,((((((((((Peru4109:0.0,Peru6510:0.0)[&label=1.0]:0.006702,Peru8685:0.011214)[&label=1.0]:0.001081,Peru8235:0.003892)[&label=0.69]:2.76E-4,(Peru7695:0.006977,(Peru6069:0.002787,(Peru7350:0.0,Peru7739:2.77E-4)[&label=1.0]:0.009443)[&label=0.76]:3.03E-4)[&label=1.0]:0.001954)[&label=0.87]:5.54E-4,(((((Peru7781:0.0,Peru6138:0.0)[&label=0.97]:0.00111,Peru6247:0.003062)[&label=1.0]:0.001943,Peru8264:0.004179)[&label=1.0]:0.004475,(Peru6092:0.0,Peru6091:0.0)[&label=1.0]:0.005297)[&label=0.65]:2.56E-4,(Peru7909:0.005854,Peru7555:0.004453)[&label=0.95]:0.0011)[&label=0.99]:0.003054)[&label=0.96]:2.76E-4,((((Peru8114:8.3E-4,(((Peru8255:0.002221,Peru7822:0.003055)[&label=0.75]:0.0,Peru7036:0.001386)[&label=0.46]:0.0,(Peru7874:0.001662,Peru7826:0.001385)[&label=0.66]:2.76E-4)[&label=0.71]:0.0)[&label=0.96]:8.3E-4,((((((Peru8171:0.00277,(Peru8720:2.76E-4,((Peru8258:0.001107,Peru8174:0.001107)[&label=0.55]:0.0,Peru7269:8.3E-4)[&label=0.91]:2.77E-4)[&label=1.0]:0.001662)[&label=0.88]:0.0,Peru7124:2.77E-4)[&label=0.87]:5.53E-4,Peru5204:0.003051)[&label=0.86]:5.54E-4,(Peru7928:0.002776,Peru7177:0.001109)[&label=0.93]:5.53E-4)[&label=0.2]:0.0,Peru7063:0.00194)[&label=0.21]:0.0,Peru7341:0.001386)[&label=0.14]:0.0)[&label=0.61]:2.77E-4,((Peru7104:0.001107,((((Peru3294:8.29E-4,Peru7435:0.0)[&label=0.98]:0.001661,((Peru8927:0.0,Peru7264:0.0)[&label=0.68]:2.77E-4,Peru7335:0.0)[&label=0.85]:5.54E-4)[&label=0.92]:6.45E-4,(Peru7944:0.001385,Peru3343:0.0)[&label=0.96]:8.3E-4)[&label=0.49]:0.0,Peru7225:0.002494)[&label=0.59]:0.0)[&label=0.77]:8.63E-4,Peru7117:0.007782)[&label=0.65]:4.29E-4)[&label=0.54]:0.0,((Peru7911:0.001107,Peru5198:0.001662)[&label=0.55]:0.0,Peru7522:8.3E-4)[&label=0.86]:5.53E-4)[&label=1.0]:0.002218)[&label=1.0]:0.008106,((((((Peru2941:0.004293,Peru8778:9.88E-4)[&label=0.81]:8.31E-4,(Peru4003:0.001664,Peru2940:0.003613)[&label=0.91]:9.47E-4)[&label=1.0]:0.00293,Peru4484:0.002772)[&label=0.69]:0.0,Peru7628:0.002348)[&label=1.0]:0.002641,Peru7357:0.002496)[&label=0.95]:8.3E-4,((((((Peru6529:0.0,(Peru6283:0.0,(Peru8737:2.76E-4,Peru7046:5.53E-4)[&label=0.41]:0.0)[&label=0.32]:0.0)[&label=0.63]:2.76E-4,(Peru7315:8.3E-4,Peru8887:0.001107)[&label=0.59]:0.0)[&label=1.0]:0.002773,Peru7578:0.005572)[&label=1.0]:0.002221,Peru7396:0.005282)[&label=0.52]:2.72E-4,Peru7895:0.006976)[&label=0.26]:0.0,Peru7132:0.008072)[&label=0.84]:0.0)[&label=1.0]:0.010926)[&label=1.0]:0.013255,((((((Peru6419:0.001433,Peru8164:8.45E-4)[&label=0.95]:0.0,Peru8124:5.56E-4)[&label=0.92]:0.001782,Peru7984:0.00196)[&label=0.55]:0.0,(Peru6382:8.33E-4,Peru7294:0.001114)[&label=0.86]:0.001946)[&label=0.28]:0.0,Peru7037:8.37E-4)[&label=0.46]:0.0,Peru8246:0.002508)[&label=1.0]:0.038857)[&label=0.47]:2.5E-5,Peru3282:0.033597)[&label=0.37]:0.0,(((((((((Peru6589:0.0,(Peru7877:2.78E-4,Peru8681:9.04E-4)[&label=0.38]:3.01E-4)[&label=0.36]:0.0,Peru6486:0.0)[&label=0.33]:0.0,Peru6579:2.78E-4)[&label=0.31]:3.17E-4,Peru8017:2.79E-4)[&label=0.58]:6.56E-4,Peru7710:2.6E-4)[&label=1.0]:0.032581,(((((Peru3308:0.00111,Peru2964:5.59E-4)[&label=1.0]:0.001401,Peru3059:0.001388)[&label=0.8]:5.59E-4,Peru2968:5.6E-4)[&label=0.67]:2.82E-4,Peru6150:0.002499)[&label=0.92]:0.0,Peru8900:2.77E-4)[&label=1.0]:0.027106)[&label=0.89]:6.45E-4,Peru7308:0.025555)[&label=1.0]:0.002,Peru7114:0.023189)[&label=1.0]:0.003693,((Peru7336:0.012127,(Peru7081:0.003054,Peru7347:0.004752)[&label=1.0]:0.007379)[&label=1.0]:0.014067,((Peru3022:0.025686,Peru7414:0.024749)[&label=1.0]:0.003521,((Peru8144:8.32E-4,((((((Peru2907:0.001943,(Peru8096:0.002776,(Peru8515:0.0,Peru7189:0.0)[&label=1.0]:0.003056)[&label=0.68]:0.0)[&label=0.38]:0.0,Peru9059:0.001109)[&label=0.66]:0.0,Peru8224:8.32E-4)[&label=0.87]:5.54E-4,(((Peru4098:0.001294,Peru7746:2.77E-4)[&label=0.98]:6.48E-4,((Peru7058:2.77E-4,Peru7486:0.0)[&label=0.33]:0.0,Peru7205:0.0)[&label=0.63]:2.77E-4)[&label=0.72]:2.77E-4,Peru7867:5.54E-4)[&label=0.86]:5.55E-4)[&label=0.59]:2.77E-4,((((((Peru4479:0.0,(Peru8062:0.0,(Peru7068:0.0,(Peru3392:0.0,(Peru6436:0.0,Peru7164:0.0)[&label=0.14]:0.0)[&label=0.07]:0.0)[&label=0.06]:0.0)[&label=0.06]:0.0)[&label=0.97]:0.001109,Peru7497:0.00111)[&label=0.92]:5.55E-4,(Peru5202:0.0,Peru5203:0.0)[&label=1.0]:0.001664)[&label=0.73]:2.77E-4,Peru5206:0.001387)[&label=0.71]:2.77E-4,(((((Peru7755:2.77E-4,Peru7095:2.77E-4)[&label=0.23]:0.0,(Peru6517:0.0,Peru6512:0.0)[&label=0.64]:2.77E-4)[&label=0.62]:2.77E-4,Peru8055:5.54E-4)[&label=0.64]:2.77E-4,Peru8638:8.31E-4)[&label=0.62]:0.0,(((Peru6145:0.0,(((((Peru6527:8.31E-4,(Peru7360:5.55E-4,(Peru8169:8.32E-4,Peru7455:0.001109)[&label=0.2]:0.0)[&label=0.15]:0.0)[&label=0.13]:0.0,Peru8196:5.54E-4)[&label=0.1]:0.0,Peru8676:2.77E-4)[&label=0.22]:0.0,Peru8127:0.0)[&label=0.12]:0.0,Peru8041:0.0)[&label=0.13]:0.0)[&label=0.24]:0.0,Peru8204:5.54E-4)[&label=0.5]:0.0,Peru7717:5.54E-4)[&label=0.68]:2.77E-4)[&label=1.0]:0.001942)[&label=0.93]:8.32E-4,((((Peru6121:0.0,Peru4013:2.77E-4)[&label=0.61]:2.77E-4,Peru7303:0.00111)[&label=0.45]:0.0,Peru7218:5.55E-4)[&label=0.7]:2.77E-4,Peru5197:5.55E-4)[&label=1.0]:0.002222)[&label=0.28]:0.0)[&label=0.07]:0.0,(Peru8959:0.00222,((Peru8711:5.54E-4,((Peru6461:0.0,Peru6462:0.0)[&label=0.91]:5.54E-4,(((((((((Peru7437:0.0,Peru6127:0.0)[&label=0.98]:8.31E-4,Peru7860:8.31E-4)[&label=0.23]:0.0,Peru7406:5.54E-4)[&label=0.22]:0.0,Peru8143:5.54E-4)[&label=0.36]:0.0,Peru6474:2.77E-4)[&label=0.44]:0.0,Peru7606:0.0)[&label=0.15]:0.0,Peru6135:0.0)[&label=0.08]:0.0,Peru6393:0.0)[&label=0.12]:0.0,Peru6090:0.0)[&label=0.93]:0.001108)[&label=0.33]:0.0)[&label=0.54]:0.0,((Peru7953:2.77E-4,Peru8628:0.0)[&label=0.49]:0.0,Peru8102:0.0)[&label=1.0]:0.001109)[&label=0.96]:8.31E-4)[&label=0.65]:2.77E-4)[&label=0.31]:0.0)[&label=1.0]:0.001397,((((((((((((((((Peru7673:8.31E-4,((Peru6422:0.0,Peru6442:8.31E-4)[&label=1.0]:0.001942,Peru5209:8.31E-4)[&label=0.16]:0.0)[&label=0.06]:0.0,(Peru6438:0.0,Peru8743:2.77E-4)[&label=0.65]:2.77E-4)[&label=0.03]:0.0,((Peru7656:0.001108,Peru7151:2.77E-4)[&label=0.59]:0.0,Peru7651:0.0)[&label=0.66]:2.77E-4)[&label=0.04]:0.0,(Peru6402:0.0,Peru6603:0.0)[&label=0.94]:8.31E-4)[&label=0.03]:0.0,Peru8186:8.31E-4)[&label=0.04]:0.0,Peru7891:5.54E-4)[&label=0.08]:0.0,Peru6130:5.54E-4)[&label=0.11]:0.0,Peru7268:2.77E-4)[&label=0.11]:0.0,Peru6064:2.77E-4)[&label=0.13]:0.0,Peru8189:0.0)[&label=0.09]:0.0,Peru6054:0.0)[&label=0.09]:0.0,Peru7678:0.0)[&label=0.19]:0.0,Peru8629:0.0)[&label=0.83]:0.0,Peru7505:8.33E-4)[&label=1.0]:0.001386,((Peru6240:0.00502,Peru2901:0.003065)[&label=0.95]:8.25E-4,(Peru6550:0.0,Peru6507:0.0)[&label=0.98]:0.001386)[&label=0.58]:0.0)[&label=0.65]:2.77E-4,(Peru7721:0.002497,(Peru8538:2.77E-4,((((((Peru6044:0.0,(Peru7330:0.0,Peru8084:2.77E-4)[&label=0.34]:0.0)[&label=0.72]:2.77E-4,Peru6017:8.32E-4)[&label=0.35]:0.0,Peru7841:0.0)[&label=0.47]:0.0,Peru7230:2.77E-4)[&label=0.61]:2.77E-4,(((((((Peru8066:0.0,(Peru7951:2.77E-4,Peru5201:5.54E-4)[&label=0.82]:2.77E-4)[&label=0.67]:2.77E-4,Peru7332:2.77E-4)[&label=0.21]:0.0,Peru7184:0.0)[&label=0.01]:0.0,Peru8705:0.0)[&label=0.04]:0.0,Peru6381:0.0)[&label=0.06]:0.0,Peru8018:0.0)[&label=0.56]:0.0,Peru5275:0.0)[&label=0.68]:2.77E-4)[&label=0.26]:0.0,(((Peru8033:5.55E-4,Peru5210:4.43E-4)[&label=0.14]:0.0,Peru7532:0.0)[&label=1.0]:0.001776,(((Peru6522:0.0,Peru6573:2.76E-4)[&label=0.49]:0.0,Peru5208:0.0)[&label=0.61]:1.0E-6,(Peru8569:2.77E-4,(Peru6229:2.77E-4,(((Peru7498:2.78E-4,(Peru6374:0.0,Peru6580:0.0)[&label=0.6]:2.77E-4)[&label=0.01]:0.0,((Peru7463:8.32E-4,Peru7379:2.77E-4)[&label=0.05]:0.0,Peru7885:2.77E-4)[&label=0.0]:0.0)[&label=0.0]:0.0,((((Peru8632:2.77E-4,(Peru8247:0.001111,Peru8098:0.0)[&label=0.51]:0.0)[&label=0.86]:5.54E-4,Peru8609:2.77E-4)[&label=0.03]:0.0,Peru7714:2.77E-4)[&label=0.0]:0.0,(Peru7460:5.54E-4,((Peru7171:0.0,Peru5207:2.77E-4)[&label=0.59]:2.77E-4,((Peru7507:2.77E-4,(Peru6592:0.0,Peru6559:5.54E-4)[&label=0.86]:5.54E-4)[&label=0.03]:0.0,(((((((((((Peru8165:2.77E-4,(Peru8146:2.77E-4,(Peru6562:0.0,Peru6528:0.0)[&label=0.69]:2.77E-4)[&label=0.21]:0.0)[&label=0.2]:0.0,Peru7995:0.0)[&label=0.07]:0.0,Peru8002:0.0)[&label=0.03]:0.0,Peru7842:0.0)[&label=0.14]:0.0,Peru7934:0.0)[&label=0.56]:2.77E-4,Peru8797:8.32E-4)[&label=0.85]:5.55E-4,Peru8129:2.77E-4)[&label=0.05]:0.0,Peru8624:5.54E-4)[&label=0.01]:0.0,(Peru8728:2.77E-4,Peru7749:0.001109)[&label=0.05]:0.0)[&label=0.0]:0.0,(((Peru7801:2.77E-4,(Peru8047:5.54E-4,Peru7364:0.0)[&label=0.69]:0.0)[&label=0.33]:0.0,Peru7929:0.0)[&label=0.54]:2.77E-4,Peru7307:8.31E-4)[&label=0.01]:0.0)[&label=0.0]:0.0,(Peru8152:2.77E-4,(Peru7735:2.77E-4,Peru7174:2.77E-4)[&label=0.91]:5.54E-4)[&label=0.02]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.0]:0.0)[&label=0.08]:0.0)[&label=0.03]:0.0)[&label=0.22]:0.0)[&label=0.99]:0.001665)[&label=0.36]:0.0)[&label=0.91]:5.45E-4)[&label=1.0]:0.018057)[&label=1.0]:0.001934)[&label=0.94]:8.36E-4)[&label=0.65]:2.76E-4)[&label=1.0]:0.017917)[&label=1.0]:0.009589)[&label=1.0]:0.006094)[&label=1.0]:0.022813);
end;
begin figtree;
set appearance.backgroundColorAttribute="Default";
set appearance.backgroundColour=#ffffff;
set appearance.branchColorAttribute="User selection";
set appearance.branchColorGradient=false;
set appearance.branchLineWidth=1.0;
set appearance.branchMinLineWidth=0.0;
set appearance.branchWidthAttribute="Fixed";
set appearance.foregroundColour=#000000;
set appearance.hilightingGradient=false;
set appearance.selectionColour=#2d3680;
set branchLabels.colorAttribute="User selection";
set branchLabels.displayAttribute="Branch times";
set branchLabels.fontName="sansserif";
set branchLabels.fontSize=8;
set branchLabels.fontStyle=0;
set branchLabels.isShown=false;
set branchLabels.significantDigits=4;
set layout.expansion=0;
set layout.layoutType="RECTILINEAR";
set layout.zoom=0;
set legend.attribute="label";
set legend.fontSize=10.0;
set legend.isShown=false;
set legend.significantDigits=4;
set nodeBars.barWidth=4.0;
set nodeBars.displayAttribute=null;
set nodeBars.isShown=false;
set nodeLabels.colorAttribute="User selection";
set nodeLabels.displayAttribute="Node ages";
set nodeLabels.fontName="sansserif";
set nodeLabels.fontSize=8;
set nodeLabels.fontStyle=0;
set nodeLabels.isShown=false;
set nodeLabels.significantDigits=4;
set nodeShapeExternal.colourAttribute="User selection";
set nodeShapeExternal.isShown=false;
set nodeShapeExternal.minSize=10.0;
set nodeShapeExternal.scaleType=Width;
set nodeShapeExternal.shapeType=Circle;
set nodeShapeExternal.size=4.0;
set nodeShapeExternal.sizeAttribute="Fixed";
set nodeShapeInternal.colourAttribute="User selection";
set nodeShapeInternal.isShown=false;
set nodeShapeInternal.minSize=10.0;
set nodeShapeInternal.scaleType=Width;
set nodeShapeInternal.shapeType=Circle;
set nodeShapeInternal.size=4.0;
set nodeShapeInternal.sizeAttribute="Fixed";
set polarLayout.alignTipLabels=false;
set polarLayout.angularRange=0;
set polarLayout.rootAngle=0;
set polarLayout.rootLength=100;
set polarLayout.showRoot=true;
set radialLayout.spread=0.0;
set rectilinearLayout.alignTipLabels=false;
set rectilinearLayout.curvature=0;
set rectilinearLayout.rootLength=100;
set scale.offsetAge=0.0;
set scale.rootAge=1.0;
set scale.scaleFactor=1.0;
set scale.scaleRoot=false;
set scaleAxis.automaticScale=true;
set scaleAxis.fontSize=8.0;
set scaleAxis.isShown=false;
set scaleAxis.lineWidth=1.0;
set scaleAxis.majorTicks=1.0;
set scaleAxis.minorTicks=0.5;
set scaleAxis.origin=0.0;
set scaleAxis.reverseAxis=false;
set scaleAxis.showGrid=true;
set scaleBar.automaticScale=true;
set scaleBar.fontSize=10.0;
set scaleBar.isShown=true;
set scaleBar.lineWidth=1.0;
set scaleBar.scaleRange=0.0;
set tipLabels.colorAttribute="User selection";
set tipLabels.displayAttribute="Names";
set tipLabels.fontName="sansserif";
set tipLabels.fontSize=8;
set tipLabels.fontStyle=0;
set tipLabels.isShown=true;
set tipLabels.significantDigits=4;
set trees.order=false;
set trees.orderType="increasing";
set trees.rooting=false;
set trees.rootingType="User Selection";
set trees.transform=false;
set trees.transformType="cladogram";
end;