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Should Include rug plot or Rotate X-axis Label options under Plot Aesthetic Settings be doing anything for tm_g_gh_density_distribution_plot?
Include rug plot
Rotate X-axis Label
Plot Aesthetic Settings
tm_g_gh_density_distribution_plot
library(dplyr) # original ARM value = dose value arm_mapping <- list( "A: Drug X" = "150mg QD", "B: Placebo" = "Placebo", "C: Combination" = "Combination" ) ADSL <- goshawk::rADSL ADLB <- goshawk::rADLB var_labels <- lapply(ADLB, function(x) attributes(x)$label) ADLB <- ADLB %>% dplyr::mutate( AVISITCD = dplyr::case_when( AVISIT == "SCREENING" ~ "SCR", AVISIT == "BASELINE" ~ "BL", grepl("WEEK", AVISIT) ~ paste("W", stringr::str_extract(AVISIT, "(?<=(WEEK ))[0-9]+")), TRUE ~ as.character(NA) ), AVISITCDN = dplyr::case_when( AVISITCD == "SCR" ~ -2, AVISITCD == "BL" ~ 0, grepl("W", AVISITCD) ~ as.numeric(gsub("[^0-9]*", "", AVISITCD)), TRUE ~ as.numeric(NA) ), AVISITCD = factor(AVISITCD) %>% reorder(AVISITCDN), TRTORD = dplyr::case_when( ARMCD == "ARM C" ~ 1, ARMCD == "ARM B" ~ 2, ARMCD == "ARM A" ~ 3 ), ARM = as.character(arm_mapping[match(ARM, names(arm_mapping))]), ARM = factor(ARM) %>% reorder(TRTORD), ACTARM = as.character(arm_mapping[match(ACTARM, names(arm_mapping))]), ACTARM = factor(ACTARM) %>% reorder(TRTORD) ) attr(ADLB[["ARM"]], "label") <- var_labels[["ARM"]] attr(ADLB[["ACTARM"]], "label") <- var_labels[["ACTARM"]] app <- teal::init( data = teal.data::cdisc_data( teal.data::cdisc_dataset("ADSL", ADSL, code = "ADSL <- goshawk::rADSL"), teal.data::cdisc_dataset( "ADLB", ADLB, code = "ADLB <- goshawk::rADLB var_labels <- lapply(ADLB, function(x) attributes(x)$label) ADLB <- ADLB %>% dplyr::mutate(AVISITCD = dplyr::case_when( AVISIT == 'SCREENING' ~ 'SCR', AVISIT == 'BASELINE' ~ 'BL', grepl('WEEK', AVISIT) ~ paste('W', stringr::str_extract(AVISIT, '(?<=(WEEK ))[0-9]+')), TRUE ~ as.character(NA)), AVISITCDN = dplyr::case_when( AVISITCD == 'SCR' ~ -2, AVISITCD == 'BL' ~ 0, grepl('W', AVISITCD) ~ as.numeric(gsub('[^0-9]*', '', AVISITCD)), TRUE ~ as.numeric(NA)), AVISITCD = factor(AVISITCD) %>% reorder(AVISITCDN), TRTORD = dplyr::case_when( ARMCD == 'ARM C' ~ 1, ARMCD == 'ARM B' ~ 2, ARMCD == 'ARM A' ~ 3), ARM = as.character(arm_mapping[match(ARM, names(arm_mapping))]), ARM = factor(ARM) %>% reorder(TRTORD), ACTARM = as.character(arm_mapping[match(ACTARM, names(arm_mapping))]), ACTARM = factor(ACTARM) %>% reorder(TRTORD)) attr(ADLB[['ARM']], 'label') <- var_labels[['ARM']] attr(ADLB[['ACTARM']], 'label') <- var_labels[['ACTARM']]", vars = list(arm_mapping = arm_mapping) ), check = TRUE ), modules = teal::modules( teal.goshawk::tm_g_gh_density_distribution_plot( label = "Density Distribution Plot", dataname = "ADLB", param_var = "PARAMCD", param = choices_selected(c("ALT", "CRP", "IGA"), "ALT"), xaxis_var = choices_selected(c("AVAL", "BASE", "CHG", "PCHG"), "AVAL"), trt_group = choices_selected(c("ARM", "ACTARM"), "ARM"), color_manual = c( "150mg QD" = "#000000", "Placebo" = "#3498DB", "Combination" = "#E74C3C" ), color_comb = "#39ff14", comb_line = TRUE, plot_height = c(500, 200, 2000), font_size = c(12, 8, 20), line_size = c(1, .25, 3), hline_arb = c(.02, .05), hline_arb_color = c("red", "black"), hline_arb_label = c("Horizontal Line A", "Horizontal Line B") ) ) ) if (interactive()) { shinyApp(app$ui, app$server) }
The text was updated successfully, but these errors were encountered:
only one that doesn't affect the plot is the rotation checkbox. the others do. correlation plot has similar UI and it does rotate the values.
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@m7pr I continue to observe this from my testing today. isn't this a goshawk issue versus a teal.goshawk issue?
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video1042041576.mp4
Should
Include rug plot
orRotate X-axis Label
options underPlot Aesthetic Settings
be doing anything fortm_g_gh_density_distribution_plot
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The text was updated successfully, but these errors were encountered: