From 05cfb6bd0ce1e6090607849124e5e81daddb134b Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Szymon=20=C5=81opaciuk?= <szymon.lopaciuk@cern.ch>
Date: Mon, 8 Jan 2018 10:52:45 +0100
Subject: [PATCH 1/2] =?UTF-8?q?tests:=20remove=20xmlns=20from=20test=5Fref?=
 =?UTF-8?q?erences=20in=20edp=20Due=20to=20scrapy/parsel#99=20test=20becam?=
 =?UTF-8?q?e=20invalid,=20this=20removes=20the=20namespace=20declarations?=
 =?UTF-8?q?=20from=20raw=5Freferences.=20Signed-off-by:=20Szymon=20=C5=81o?=
 =?UTF-8?q?paciuk=20<szymon.lopaciuk@cern.ch>?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 tests/unit/test_edp.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/unit/test_edp.py b/tests/unit/test_edp.py
index 3ff75717..c3b78e47 100644
--- a/tests/unit/test_edp.py
+++ b/tests/unit/test_edp.py
@@ -587,7 +587,7 @@ def test_references(record_references_only):
         'journal_title': u'J. Nucl. Radiochem. Sci.',
         'journal_volume': u'10',
         'number': u'5a',
-        'raw_reference': u'<mixed-citation xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" publication-type="journal" id="a"><string-name><given-names>R.V.</given-names> <surname>Krishnan</surname></string-name>, <string-name><given-names>G.</given-names> <surname>Panneerselvam</surname></string-name>, <string-name><given-names>P.</given-names> <surname>Manikandan</surname></string-name> <string-name><given-names>M.P.</given-names> <surname>Antony</surname></string-name>, <string-name><given-names>K.</given-names> <surname>Nagarajan</surname></string-name>, <source>J. Nucl. Radiochem. Sci.</source>, <volume>10</volume>.<issue>1</issue>, <fpage>19</fpage>\u2013<lpage>26</lpage> (<year>2009</year>).</mixed-citation>',
+        'raw_reference': u'<mixed-citation publication-type="journal" id="a"><string-name><given-names>R.V.</given-names> <surname>Krishnan</surname></string-name>, <string-name><given-names>G.</given-names> <surname>Panneerselvam</surname></string-name>, <string-name><given-names>P.</given-names> <surname>Manikandan</surname></string-name> <string-name><given-names>M.P.</given-names> <surname>Antony</surname></string-name>, <string-name><given-names>K.</given-names> <surname>Nagarajan</surname></string-name>, <source>J. Nucl. Radiochem. Sci.</source>, <volume>10</volume>.<issue>1</issue>, <fpage>19</fpage>\u2013<lpage>26</lpage> (<year>2009</year>).</mixed-citation>',
         'year': u'2009'
     }
 

From 55f2f7ef3cfb85a6a56c03dc69849b3085538d8a Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Szymon=20=C5=81opaciuk?= <szymon.lopaciuk@cern.ch>
Date: Mon, 8 Jan 2018 11:09:45 +0100
Subject: [PATCH 2/2] =?UTF-8?q?parsers:=20remove=20cleanup=5Fnamespaces=20?=
 =?UTF-8?q?from=20JATS=20Unnecessary,=20as=20new=20version=20of=20scrapy?=
 =?UTF-8?q?=20handles=20it.=20Signed-off-by:=20Szymon=20=C5=81opaciuk=20<s?=
 =?UTF-8?q?zymon.lopaciuk@cern.ch>?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 hepcrawl/parsers/jats.py | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/hepcrawl/parsers/jats.py b/hepcrawl/parsers/jats.py
index 6a1aa524..e8a29c0d 100644
--- a/hepcrawl/parsers/jats.py
+++ b/hepcrawl/parsers/jats.py
@@ -20,8 +20,6 @@
 from inspire_utils.date import PartialDate
 from inspire_utils.helpers import maybe_int, remove_tags
 
-from lxml import etree  # needed until a new release of parsel is made
-
 from ..utils import get_first, get_node
 
 
@@ -459,7 +457,6 @@ def get_root_node(jats_record):
         else:
             root = jats_record
         root.remove_namespaces()
-        etree.cleanup_namespaces(root.root)
 
         return root