From 9e5c0759539e2bdedd8ebabdf2a8f8cc9f62cc2e Mon Sep 17 00:00:00 2001
From: Filipe Fernandes <ocefpaf@gmail.com>
Date: Tue, 23 Jul 2024 12:24:18 +0200
Subject: [PATCH 1/2] fix link and drop deprecated xlrd

---
 .binder/environment-python_and_r.yml                          | 4 ++--
 .binder/environment.yml                                       | 4 ++--
 .../data_management_notebooks/2020-12-08-DataToDwC.ipynb      | 4 ++--
 3 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/.binder/environment-python_and_r.yml b/.binder/environment-python_and_r.yml
index 35c761ce..6442dad6 100644
--- a/.binder/environment-python_and_r.yml
+++ b/.binder/environment-python_and_r.yml
@@ -26,8 +26,8 @@ dependencies:
   - gridgeo
   - humanize
   - hvplot
-  - ioos-metrics
   - ioos_qc
+  - ioos-metrics
   - ipyleaflet
   - joblib
   - jupyter
@@ -42,6 +42,7 @@ dependencies:
   - oceans
   - oct2py
   - odvc
+  - openpyxl
   - palettable
   - phantomjs
   - pocean-core >=3.1
@@ -67,7 +68,6 @@ dependencies:
   - utide
   - windrose
   - xarray
-  - xlrd
   - xmltodict
   - zarr
   # R packages.
diff --git a/.binder/environment.yml b/.binder/environment.yml
index 6ce762ed..78f9e7f9 100644
--- a/.binder/environment.yml
+++ b/.binder/environment.yml
@@ -25,8 +25,8 @@ dependencies:
   - gridgeo
   - humanize
   - hvplot
-  - ioos-metrics
   - ioos_qc
+  - ioos-metrics
   - ipyleaflet
   - joblib
   - jupyter
@@ -41,6 +41,7 @@ dependencies:
   - oceans
   - oct2py
   - odvc
+  - openpyxl
   - palettable
   - phantomjs
   - pocean-core >=3.1
@@ -66,6 +67,5 @@ dependencies:
   - utide
   - windrose
   - xarray
-  - xlrd
   - xmltodict
   - zarr
diff --git a/jupyterbook/content/code_gallery/data_management_notebooks/2020-12-08-DataToDwC.ipynb b/jupyterbook/content/code_gallery/data_management_notebooks/2020-12-08-DataToDwC.ipynb
index 05f74281..b3d2a9bb 100644
--- a/jupyterbook/content/code_gallery/data_management_notebooks/2020-12-08-DataToDwC.ipynb
+++ b/jupyterbook/content/code_gallery/data_management_notebooks/2020-12-08-DataToDwC.ipynb
@@ -244,8 +244,8 @@
    ],
    "source": [
     "url = (\n",
-    "    \"https://github.com/ioos/notebooks_demos/\"\n",
-    "    \"raw/main/ioos_code_lab/jupyterbook/content/code_gallery/data/\"\n",
+    "    \"https://raw.githubusercontent.com/ioos/ioos_code_lab/main/\"\n",
+    "    \"jupyterbook/content/code_gallery/data/\"\n",
     ")\n",
     "file = \"MadeUpDataForBiologicalDataTraining.csv\"\n",
     "df = pd.read_csv(url + file, header=[0])\n",

From 643d302e905b1d4b22e5dc54cd9515f0dc380407 Mon Sep 17 00:00:00 2001
From: Filipe Fernandes <ocefpaf@gmail.com>
Date: Tue, 6 Aug 2024 13:46:21 +0200
Subject: [PATCH 2/2] use https

---
 .../2021-10-25-ERDDAP-interpolate.ipynb                       | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/jupyterbook/content/code_gallery/data_analysis_and_visualization_notebooks/2021-10-25-ERDDAP-interpolate.ipynb b/jupyterbook/content/code_gallery/data_analysis_and_visualization_notebooks/2021-10-25-ERDDAP-interpolate.ipynb
index 8f3b8a7b..b244aa15 100644
--- a/jupyterbook/content/code_gallery/data_analysis_and_visualization_notebooks/2021-10-25-ERDDAP-interpolate.ipynb
+++ b/jupyterbook/content/code_gallery/data_analysis_and_visualization_notebooks/2021-10-25-ERDDAP-interpolate.ipynb
@@ -243,7 +243,7 @@
     "nearby = 4\n",
     "\n",
     "url = (\n",
-    "    \"http://oceanlab3.rsmas.miami.edu/erddap/\"\n",
+    "    \"https://oceanlab3.rsmas.miami.edu/erddap/\"\n",
     "    f\"convert/interpolate.{response}?\"\n",
     "    f\"TimeLatLonTable={quote_plus(time_lat_lon)}\"\n",
     "    f\"&requestCSV={dataset_id}/{variable}/{algorithm}/{nearby}\"\n",
@@ -410,7 +410,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.5"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,