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d3sparql-dendrogram.html
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d3sparql-dendrogram.html
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<!DOCTYPE html>
<meta charset="UTF-8">
<html>
<head>
<link rel="stylesheet" type="text/css" href="lib/bootstrap/css/bootstrap.css"/>
<script src="lib/d3/d3.v3.min.js"></script>
<script src="d3sparql.js"></script>
<script>
function exec() {
var endpoint = d3.select("#endpoint").property("value")
var sparql = d3.select("#sparql").property("value")
d3sparql.query(endpoint, sparql, render)
}
function render(json) {
var config = {
// for d3sparql.tree()
"root": "root_name",
"parent": "parent_name",
"child": "child_name",
// for d3sparql.dendrogram()
"width": 900,
"height": 4500,
"margin": 350,
"radius": 5,
"selector": "#result"
}
d3sparql.dendrogram(json, config)
}
function exec_offline() {
d3.json("cache/taxonomy/tardigrada.json", render)
}
function toggle() {
d3sparql.toggle()
}
</script>
</head>
<body>
<div id="query" style="margin: 10px">
<h1>d3dendrogram</h1>
<form class="form-inline">
<label>SPARQL endpoint:</label>
<div class="input-append">
<input id="endpoint" class="span5" value="http://togostanza.org/sparql" type="text">
<button class="btn" type="button" onclick="exec()">Query</button>
<button class="btn" type="button" onclick="exec_offline()">Use cache</button>
<button class="btn" type="button" onclick="toggle()"><i id="button" class="icon-chevron-up"></i></button>
</div>
</form>
<textarea id="sparql" class="span9" rows=15>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX tax: <http://ddbj.nig.ac.jp/ontologies/taxonomy/>
SELECT DISTINCT ?root_name ?parent_name ?child_name
FROM <http://togogenome.org/graph/taxonomy>
WHERE
{
VALUES ?root_name { "Tardigrada" }
?root tax:scientificName ?root_name .
?child rdfs:subClassOf+ ?root .
?child rdfs:subClassOf ?parent .
?child tax:scientificName ?child_name .
?parent tax:scientificName ?parent_name .
}
</textarea>
</div>
<div id="result"></div>
</body>
</html>