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setup.py
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setup.py
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import setuptools
from setuptools import setup
install_deps = ['numpy', 'scipy', 'natsort',
'tifffile', 'tqdm', 'numba',
'torch>=1.6',
'opencv-python-headless']
try:
import torch
a = torch.ones(2, 3)
version = int(torch.__version__[2])
if version >= 6:
install_deps.remove('torch')
except:
pass
with open("README.md", "r") as fh:
long_description = fh.read()
setup(
name="cellpose",
license="BSD",
author="Marius Pachitariu and Carsen Stringer",
author_email="[email protected]",
description="anatomical segmentation algorithm",
long_description=long_description,
long_description_content_type="text/markdown",
url="https://github.com/MouseLand/cellpose",
setup_requires=[
'pytest-runner',
'setuptools_scm',
],
packages=setuptools.find_packages(),
use_scm_version=True,
install_requires = install_deps,
tests_require=[
'pytest'
],
extras_require = {
'docs': [
'sphinx>=3.0',
'sphinxcontrib-apidoc',
'sphinx_rtd_theme',
],
'gui': [
'pyqtgraph==0.11.0rc0',
'pyqt5',
'google-cloud-storage'
]
},
include_package_data=True,
classifiers=(
"Programming Language :: Python :: 3",
"License :: OSI Approved :: BSD License",
"Operating System :: OS Independent",
),
entry_points = {
'console_scripts': [
'cellpose = cellpose.__main__:main']
}
)