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wetrun testing #311

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jordandekraker opened this issue Jul 16, 2024 · 0 comments
Open
3 tasks

wetrun testing #311

jordandekraker opened this issue Jul 16, 2024 · 0 comments

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@jordandekraker
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Currently, I have pulled some opensource data: https://osf.io/k2nme/ and Doc here: #303

TODO:

  • ideally, we should make all of these wetrun data into a snakemake workflow and automate
  • ideally outputs will be kept to avoid re-running (and updated when a PR is merged) (i.e. hippunfold_outputs_version-latest on OSF) (maybe revisit with zenodo?)
  • add some metrics to compare hippunfold version (or between commits)
  • surface-surface differences
  • subfields volume difference
  • table of failed cases (e.g. >5mm difference)
  • plot and view differences
  • add workflow for automatically running this comparison (maybe snake-batch?)
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