.gitignore

# History files
.Rhistory
.Rapp.history

# Session Data files
.RData

# User-specific files
.Ruserdata

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user/

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md

# R Environment Variables
.Renviron

.DS_Store
*.Rproj

# CDC Travel Data
data/CDC_travel_data/

# ITA data
data/Travel_ITA/
data/travel_reports/

# Case count data
data/JHUCSSE Total*

# R dev and archive
/R-in-dev-and-archive/

/IRB/

/output/

/Run_Logs/

/figures/

/data/case_data/JHUCSSE*