README.Rmd

---
output: github_document
---

<!-- README.md is generated from README.Rmd. Please edit that file -->

```{r setup, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```
# eppasm

[![Travis build status](https://travis-ci.org/mrc-ide/eppasm.svg?branch=new-master)](https://travis-ci.org/mrc-ide/eppasm)
[![Coverage status](https://codecov.io/gh/mrc-ide/eppasm/branch/new-master/graph/badge.svg)](https://codecov.io/github/mrc-ide/eppasm?branch=new-master)


The goal of eppasm is to ...

## Installation

And the development version from [GitHub](https://github.com/) with:

``` r
# install.packages("devtools")
devtools::install_github("mrc-ide/eppasm")
```
## Example

## Test files

### Botswana2018.PJNZ

* Urban/Rural epidemic configuratio
* ANC-RT census data, no site-level ANC-RT data

### Mozambique_Maputo_Cidade.PJNZ

* Subnational, single EPP region configuration
* Uses median CD4 count input