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ssb.tex
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ssb.tex
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\documentclass[10pt]{amsbook}
% \usepackage{graphicx}
\usepackage{chemarr}
\usepackage{amsfonts}
\usepackage{amssymb}
\usepackage{amsmath}
\usepackage{latexsym}
\usepackage{epsfig}
\usepackage{amsthm}
\usepackage[Lenny]{fncychap}
\usepackage{hyperref}
\renewcommand{\chaptermark}[1]{%
\markboth{\chaptername
\ \thechapter.\ #1}{}}
\usepackage{lipsum} % for filler text
\usepackage{fancyhdr}
\pagestyle{fancy}
\fancyhead{} % clear all header fields
\fancyhead[RE,LO]{\small\textsf{\rightmark}}
\fancyhead[RO,LE]{\small\textsf{\thepage}}
\renewcommand{\headrulewidth}{0pt} % no line in header area
\fancyfoot{} % clear all footer fields
\fancyfoot[C]{\small\textsf{Eric Klavins: A Systems Approach to Synthetic Biology}} % other info in "inner" position of footer line
\usepackage[small]{caption}
\input{defs.tex}
\begin{document}
%
% Title
%
\frontmatter
\pdfbookmark[0]{Front Matter}{front}
\begin{titlepage}
\begin{center}
\vspace{1in}
{\Huge\textsf{BioCircuits:\\
\vspace{0.25in}
A Systems Approach to Synthetic Biology}}
\vspace{1in}
\textsc{Eric Klavins}
\vspace{0.25in}
\textsc{Department of Electrical Engineering\\
University of Washington\\
Seattle, WA}
\vfill
% Bottom of the page
Copyright (c) 2015-2019 by Eric Klavins \\
Last compiled {\large \today}
\end{center}
\end{titlepage}
\setcounter{page}{4}
\tableofcontents
\mainmatter
\input{intro.tex}
\input{biology.tex}
\input{odes.tex}
\input{mak.tex}
\input{singular.tex}
\input{in-vivo.tex}
\input{in-vitro.tex}
\input{cme.tex}
\input{composition.tex}
\input{robustness.tex}
\input{parameters.tex}
\appendix
% Include appendix "chapters" here.
\input{mathematica.tex}
\backmatter
% Bibliographies can be prepared with BibTeX using amsplain,
% amsalpha, or (for "historical" overviews) natbib style.
\bibliographystyle{amsplain}
\pdfbookmark[0]{Bibliography}{biblio}
\bibliography{refs}
\end{document}